Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CYP46A1Q9Y6A2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CYP46A1Q9Y6A2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CYP46A1Q9Y6A2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.64■■■□□ 2.66
CYP46A1Q9Y6A2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
CYP46A1Q9Y6A2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.64■■■□□ 2.65
CYP46A1Q9Y6A2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.64■■■□□ 2.65
CYP46A1Q9Y6A2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CYP46A1Q9Y6A2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CYP46A1Q9Y6A2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CYP46A1Q9Y6A2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
CYP46A1Q9Y6A2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
CYP46A1Q9Y6A2 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.62■■■□□ 2.65
CYP46A1Q9Y6A2 ABCB10P3-201ENST00000561950 2166 ntBASIC31.62■■■□□ 2.65
CYP46A1Q9Y6A2 AL135925.1-201ENST00000605920 1701 ntBASIC31.62■■■□□ 2.65
CYP46A1Q9Y6A2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.61■■■□□ 2.65
CYP46A1Q9Y6A2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CYP46A1Q9Y6A2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CYP46A1Q9Y6A2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CYP46A1Q9Y6A2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.58■■■□□ 2.65
CYP46A1Q9Y6A2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.57■■■□□ 2.65
CYP46A1Q9Y6A2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CYP46A1Q9Y6A2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CYP46A1Q9Y6A2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CYP46A1Q9Y6A2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
CYP46A1Q9Y6A2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CYP46A1Q9Y6A2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CYP46A1Q9Y6A2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CYP46A1Q9Y6A2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CYP46A1Q9Y6A2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CYP46A1Q9Y6A2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CYP46A1Q9Y6A2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
CYP46A1Q9Y6A2 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
CYP46A1Q9Y6A2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CYP46A1Q9Y6A2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CYP46A1Q9Y6A2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CYP46A1Q9Y6A2 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CYP46A1Q9Y6A2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CYP46A1Q9Y6A2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CYP46A1Q9Y6A2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.49■■■□□ 2.63
CYP46A1Q9Y6A2 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CYP46A1Q9Y6A2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.48■■■□□ 2.63
CYP46A1Q9Y6A2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.48■■■□□ 2.63
CYP46A1Q9Y6A2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
CYP46A1Q9Y6A2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CYP46A1Q9Y6A2 AC139426.1-201ENST00000568218 2529 ntBASIC31.44■■■□□ 2.62
CYP46A1Q9Y6A2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.43■■■□□ 2.62
CYP46A1Q9Y6A2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.43■■■□□ 2.62
CYP46A1Q9Y6A2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CYP46A1Q9Y6A2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CYP46A1Q9Y6A2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
CYP46A1Q9Y6A2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
CYP46A1Q9Y6A2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.4■■■□□ 2.62
CYP46A1Q9Y6A2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CYP46A1Q9Y6A2 AC136428.2-201ENST00000563187 214 ntBASIC31.4■■■□□ 2.62
CYP46A1Q9Y6A2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CYP46A1Q9Y6A2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CYP46A1Q9Y6A2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
CYP46A1Q9Y6A2 AC097358.2-201ENST00000607541 1159 ntBASIC31.38■■■□□ 2.61
CYP46A1Q9Y6A2 AL391121.1-201ENST00000607967 1349 ntBASIC31.38■■■□□ 2.61
CYP46A1Q9Y6A2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CYP46A1Q9Y6A2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CYP46A1Q9Y6A2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
CYP46A1Q9Y6A2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CYP46A1Q9Y6A2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CYP46A1Q9Y6A2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
CYP46A1Q9Y6A2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
CYP46A1Q9Y6A2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.36■■■□□ 2.61
CYP46A1Q9Y6A2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.36■■■□□ 2.61
CYP46A1Q9Y6A2 CAHM-201ENST00000604200 896 ntBASIC31.36■■■□□ 2.61
CYP46A1Q9Y6A2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CYP46A1Q9Y6A2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.35■■■□□ 2.61
CYP46A1Q9Y6A2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CYP46A1Q9Y6A2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.34■■■□□ 2.61
CYP46A1Q9Y6A2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CYP46A1Q9Y6A2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.33■■■□□ 2.61
CYP46A1Q9Y6A2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.32■■■□□ 2.61
CYP46A1Q9Y6A2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CYP46A1Q9Y6A2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
CYP46A1Q9Y6A2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CYP46A1Q9Y6A2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
CYP46A1Q9Y6A2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.31■■■□□ 2.6
CYP46A1Q9Y6A2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
CYP46A1Q9Y6A2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CYP46A1Q9Y6A2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.29■■■□□ 2.6
CYP46A1Q9Y6A2 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CYP46A1Q9Y6A2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CYP46A1Q9Y6A2 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.27■■■□□ 2.6
CYP46A1Q9Y6A2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CYP46A1Q9Y6A2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.6
CYP46A1Q9Y6A2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.26■■■□□ 2.6
CYP46A1Q9Y6A2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
CYP46A1Q9Y6A2 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
CYP46A1Q9Y6A2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CYP46A1Q9Y6A2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CYP46A1Q9Y6A2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.25■■■□□ 2.59
CYP46A1Q9Y6A2 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CYP46A1Q9Y6A2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.25■■■□□ 2.59
CYP46A1Q9Y6A2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
CYP46A1Q9Y6A2 AC010864.1-201ENST00000609407 1511 ntBASIC31.24■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms