Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC39.3■■■■□ 3.88
SLC52A1Q9NWF4 MIR3648-2-201ENST00000581792 180 ntBASIC39.29■■■■□ 3.88
SLC52A1Q9NWF4 MIR3648-1-201ENST00000615959 180 ntBASIC39.29■■■■□ 3.88
SLC52A1Q9NWF4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC39.29■■■■□ 3.88
SLC52A1Q9NWF4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC39.28■■■■□ 3.88
SLC52A1Q9NWF4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC39.28■■■■□ 3.88
SLC52A1Q9NWF4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
SLC52A1Q9NWF4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC39.27■■■■□ 3.88
SLC52A1Q9NWF4 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC39.26■■■■□ 3.88
SLC52A1Q9NWF4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC39.25■■■■□ 3.87
SLC52A1Q9NWF4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC39.25■■■■□ 3.87
SLC52A1Q9NWF4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC39.24■■■■□ 3.87
SLC52A1Q9NWF4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC39.22■■■■□ 3.87
SLC52A1Q9NWF4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC39.21■■■■□ 3.87
SLC52A1Q9NWF4 AC016575.1-201ENST00000607026 382 ntBASIC39.21■■■■□ 3.87
SLC52A1Q9NWF4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
SLC52A1Q9NWF4 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC39.19■■■■□ 3.86
SLC52A1Q9NWF4 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC39.19■■■■□ 3.86
SLC52A1Q9NWF4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC39.19■■■■□ 3.86
SLC52A1Q9NWF4 LINC01971-201ENST00000617888 1048 ntBASIC39.18■■■■□ 3.86
SLC52A1Q9NWF4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC39.17■■■■□ 3.86
SLC52A1Q9NWF4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC39.17■■■■□ 3.86
SLC52A1Q9NWF4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC39.17■■■■□ 3.86
SLC52A1Q9NWF4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC39.17■■■■□ 3.86
SLC52A1Q9NWF4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC39.16■■■■□ 3.86
SLC52A1Q9NWF4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC39.15■■■■□ 3.86
SLC52A1Q9NWF4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC39.15■■■■□ 3.86
SLC52A1Q9NWF4 DUX4L11-201ENST00000611504 1267 ntBASIC39.15■■■■□ 3.86
SLC52A1Q9NWF4 DUX4L12-201ENST00000614593 1267 ntBASIC39.15■■■■□ 3.86
SLC52A1Q9NWF4 DUX4L14-201ENST00000621227 1267 ntBASIC39.15■■■■□ 3.86
SLC52A1Q9NWF4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC39.15■■■■□ 3.86
SLC52A1Q9NWF4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC39.14■■■■□ 3.86
SLC52A1Q9NWF4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC39.13■■■■□ 3.85
SLC52A1Q9NWF4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC39.13■■■■□ 3.85
SLC52A1Q9NWF4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC39.12■■■■□ 3.85
SLC52A1Q9NWF4 CR559946.2-201ENST00000623684 991 ntBASIC39.11■■■■□ 3.85
SLC52A1Q9NWF4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC39.1■■■■□ 3.85
SLC52A1Q9NWF4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC39.09■■■■□ 3.85
SLC52A1Q9NWF4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
SLC52A1Q9NWF4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC39.08■■■■□ 3.85
SLC52A1Q9NWF4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC39.07■■■■□ 3.85
SLC52A1Q9NWF4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC39.06■■■■□ 3.84
SLC52A1Q9NWF4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC39.03■■■■□ 3.84
SLC52A1Q9NWF4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC39.03■■■■□ 3.84
SLC52A1Q9NWF4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC39.03■■■■□ 3.84
SLC52A1Q9NWF4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC39.02■■■■□ 3.84
SLC52A1Q9NWF4 HSD17B1P1-201ENST00000590052 955 ntBASIC39.02■■■■□ 3.84
SLC52A1Q9NWF4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC39.02■■■■□ 3.84
SLC52A1Q9NWF4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC39.01■■■■□ 3.84
SLC52A1Q9NWF4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
SLC52A1Q9NWF4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
SLC52A1Q9NWF4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
SLC52A1Q9NWF4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC38.97■■■■□ 3.83
SLC52A1Q9NWF4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC38.96■■■■□ 3.83
SLC52A1Q9NWF4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC38.95■■■■□ 3.83
SLC52A1Q9NWF4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
SLC52A1Q9NWF4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC38.95■■■■□ 3.83
SLC52A1Q9NWF4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC38.95■■■■□ 3.83
SLC52A1Q9NWF4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC38.95■■■■□ 3.83
SLC52A1Q9NWF4 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC38.94■■■■□ 3.82
SLC52A1Q9NWF4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC38.93■■■■□ 3.82
SLC52A1Q9NWF4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC38.93■■■■□ 3.82
SLC52A1Q9NWF4 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC38.93■■■■□ 3.82
SLC52A1Q9NWF4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC38.93■■■■□ 3.82
SLC52A1Q9NWF4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
SLC52A1Q9NWF4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC38.89■■■■□ 3.82
SLC52A1Q9NWF4 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC38.88■■■■□ 3.81
SLC52A1Q9NWF4 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC38.88■■■■□ 3.81
SLC52A1Q9NWF4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC38.87■■■■□ 3.81
SLC52A1Q9NWF4 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
SLC52A1Q9NWF4 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC38.84■■■■□ 3.81
SLC52A1Q9NWF4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC38.84■■■■□ 3.81
SLC52A1Q9NWF4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC38.84■■■■□ 3.81
SLC52A1Q9NWF4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
SLC52A1Q9NWF4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
SLC52A1Q9NWF4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC38.82■■■■□ 3.8
SLC52A1Q9NWF4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC38.82■■■■□ 3.8
SLC52A1Q9NWF4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC38.81■■■■□ 3.8
SLC52A1Q9NWF4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC38.81■■■■□ 3.8
SLC52A1Q9NWF4 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC38.79■■■■□ 3.8
SLC52A1Q9NWF4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC38.79■■■■□ 3.8
SLC52A1Q9NWF4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC38.77■■■■□ 3.8
SLC52A1Q9NWF4 DUX4L13-201ENST00000554103 1267 ntBASIC38.77■■■■□ 3.8
SLC52A1Q9NWF4 DUX4L15-201ENST00000611059 1267 ntBASIC38.77■■■■□ 3.8
SLC52A1Q9NWF4 DUX4L23-201ENST00000615195 1269 ntBASIC38.77■■■■□ 3.8
SLC52A1Q9NWF4 DUX4L24-201ENST00000617576 1269 ntBASIC38.77■■■■□ 3.8
SLC52A1Q9NWF4 DUX4L22-201ENST00000618238 1269 ntBASIC38.77■■■■□ 3.8
SLC52A1Q9NWF4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC38.77■■■■□ 3.8
SLC52A1Q9NWF4 DUX4L20-201ENST00000619712 1269 ntBASIC38.77■■■■□ 3.8
SLC52A1Q9NWF4 DUX4L21-201ENST00000622058 1269 ntBASIC38.77■■■■□ 3.8
SLC52A1Q9NWF4 DUX4L10-201ENST00000622460 1267 ntBASIC38.77■■■■□ 3.8
SLC52A1Q9NWF4 DUX4L25-201ENST00000624915 1269 ntBASIC38.77■■■■□ 3.8
SLC52A1Q9NWF4 ABHD17AP3-201ENST00000503096 1137 ntBASIC38.75■■■■□ 3.79
SLC52A1Q9NWF4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC38.75■■■■□ 3.79
SLC52A1Q9NWF4 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC38.74■■■■□ 3.79
SLC52A1Q9NWF4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
SLC52A1Q9NWF4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
SLC52A1Q9NWF4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC38.72■■■■□ 3.79
SLC52A1Q9NWF4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC38.71■■■■□ 3.79
SLC52A1Q9NWF4 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms