Protein–RNA interactions for Protein: Q9NQ03

SCRT2, Transcriptional repressor scratch 2, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT2Q9NQ03 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCRT2Q9NQ03 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCRT2Q9NQ03 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SCRT2Q9NQ03 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCRT2Q9NQ03 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SCRT2Q9NQ03 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCRT2Q9NQ03 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCRT2Q9NQ03 ST7-AS1-201ENST00000456775 1889 ntBASIC19.65■□□□□ 0.74
SCRT2Q9NQ03 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SCRT2Q9NQ03 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.64■□□□□ 0.73
SCRT2Q9NQ03 AP002365.1-201ENST00000603448 772 ntBASIC19.64■□□□□ 0.73
SCRT2Q9NQ03 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCRT2Q9NQ03 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.64■□□□□ 0.73
SCRT2Q9NQ03 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCRT2Q9NQ03 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCRT2Q9NQ03 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCRT2Q9NQ03 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCRT2Q9NQ03 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCRT2Q9NQ03 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.63■□□□□ 0.73
SCRT2Q9NQ03 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCRT2Q9NQ03 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCRT2Q9NQ03 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.61■□□□□ 0.73
SCRT2Q9NQ03 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SCRT2Q9NQ03 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCRT2Q9NQ03 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
SCRT2Q9NQ03 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCRT2Q9NQ03 DYNLL1-208ENST00000550178 581 ntBASIC19.6■□□□□ 0.73
SCRT2Q9NQ03 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCRT2Q9NQ03 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCRT2Q9NQ03 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SCRT2Q9NQ03 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
SCRT2Q9NQ03 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SCRT2Q9NQ03 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.57■□□□□ 0.72
SCRT2Q9NQ03 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SCRT2Q9NQ03 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCRT2Q9NQ03 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SCRT2Q9NQ03 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
SCRT2Q9NQ03 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SCRT2Q9NQ03 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SCRT2Q9NQ03 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCRT2Q9NQ03 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SCRT2Q9NQ03 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SCRT2Q9NQ03 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCRT2Q9NQ03 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCRT2Q9NQ03 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCRT2Q9NQ03 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCRT2Q9NQ03 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
SCRT2Q9NQ03 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.52■□□□□ 0.72
SCRT2Q9NQ03 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
SCRT2Q9NQ03 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SCRT2Q9NQ03 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.52■□□□□ 0.71
SCRT2Q9NQ03 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SCRT2Q9NQ03 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCRT2Q9NQ03 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.51■□□□□ 0.71
SCRT2Q9NQ03 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCRT2Q9NQ03 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCRT2Q9NQ03 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCRT2Q9NQ03 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCRT2Q9NQ03 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCRT2Q9NQ03 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCRT2Q9NQ03 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SCRT2Q9NQ03 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCRT2Q9NQ03 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCRT2Q9NQ03 AL031258.1-201ENST00000623562 325 ntBASIC19.49■□□□□ 0.71
SCRT2Q9NQ03 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCRT2Q9NQ03 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCRT2Q9NQ03 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCRT2Q9NQ03 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SCRT2Q9NQ03 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.46■□□□□ 0.71
SCRT2Q9NQ03 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCRT2Q9NQ03 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SCRT2Q9NQ03 AL135925.1-201ENST00000605920 1701 ntBASIC19.45■□□□□ 0.7
SCRT2Q9NQ03 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCRT2Q9NQ03 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCRT2Q9NQ03 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCRT2Q9NQ03 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCRT2Q9NQ03 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCRT2Q9NQ03 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCRT2Q9NQ03 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCRT2Q9NQ03 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCRT2Q9NQ03 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCRT2Q9NQ03 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCRT2Q9NQ03 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCRT2Q9NQ03 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.43■□□□□ 0.7
SCRT2Q9NQ03 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCRT2Q9NQ03 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.42■□□□□ 0.7
SCRT2Q9NQ03 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCRT2Q9NQ03 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCRT2Q9NQ03 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.42■□□□□ 0.7
SCRT2Q9NQ03 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCRT2Q9NQ03 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCRT2Q9NQ03 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCRT2Q9NQ03 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.42■□□□□ 0.7
SCRT2Q9NQ03 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCRT2Q9NQ03 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.41■□□□□ 0.7
SCRT2Q9NQ03 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.41■□□□□ 0.7
SCRT2Q9NQ03 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.41■□□□□ 0.7
SCRT2Q9NQ03 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
SCRT2Q9NQ03 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.41■□□□□ 0.7
SCRT2Q9NQ03 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms