Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
EFCC1Q9HA90 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
EFCC1Q9HA90 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
EFCC1Q9HA90 DUX4L11-201ENST00000611504 1267 ntBASIC31.29■■■□□ 2.6
EFCC1Q9HA90 DUX4L12-201ENST00000614593 1267 ntBASIC31.29■■■□□ 2.6
EFCC1Q9HA90 DUX4L14-201ENST00000621227 1267 ntBASIC31.29■■■□□ 2.6
EFCC1Q9HA90 CR559946.2-201ENST00000623684 991 ntBASIC31.29■■■□□ 2.6
EFCC1Q9HA90 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
EFCC1Q9HA90 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
EFCC1Q9HA90 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
EFCC1Q9HA90 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
EFCC1Q9HA90 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
EFCC1Q9HA90 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
EFCC1Q9HA90 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.25■■■□□ 2.59
EFCC1Q9HA90 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.25■■■□□ 2.59
EFCC1Q9HA90 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.24■■■□□ 2.59
EFCC1Q9HA90 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
EFCC1Q9HA90 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
EFCC1Q9HA90 LINC01971-201ENST00000617888 1048 ntBASIC31.23■■■□□ 2.59
EFCC1Q9HA90 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.22■■■□□ 2.59
EFCC1Q9HA90 AC108673.1-201ENST00000510422 1159 ntBASIC31.22■■■□□ 2.59
EFCC1Q9HA90 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
EFCC1Q9HA90 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
EFCC1Q9HA90 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
EFCC1Q9HA90 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.21■■■□□ 2.59
EFCC1Q9HA90 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.21■■■□□ 2.59
EFCC1Q9HA90 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
EFCC1Q9HA90 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
EFCC1Q9HA90 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC31.2■■■□□ 2.59
EFCC1Q9HA90 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.19■■■□□ 2.58
EFCC1Q9HA90 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC31.19■■■□□ 2.58
EFCC1Q9HA90 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
EFCC1Q9HA90 MIR6090-201ENST00000622481 60 ntBASIC31.19■■■□□ 2.58
EFCC1Q9HA90 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC31.18■■■□□ 2.58
EFCC1Q9HA90 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
EFCC1Q9HA90 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
EFCC1Q9HA90 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
EFCC1Q9HA90 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
EFCC1Q9HA90 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.15■■■□□ 2.58
EFCC1Q9HA90 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
EFCC1Q9HA90 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
EFCC1Q9HA90 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
EFCC1Q9HA90 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
EFCC1Q9HA90 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
EFCC1Q9HA90 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.12■■■□□ 2.57
EFCC1Q9HA90 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC31.11■■■□□ 2.57
EFCC1Q9HA90 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
EFCC1Q9HA90 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.09■■■□□ 2.57
EFCC1Q9HA90 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
EFCC1Q9HA90 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
EFCC1Q9HA90 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
EFCC1Q9HA90 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
EFCC1Q9HA90 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
EFCC1Q9HA90 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
EFCC1Q9HA90 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
EFCC1Q9HA90 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
EFCC1Q9HA90 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.07■■■□□ 2.56
EFCC1Q9HA90 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
EFCC1Q9HA90 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
EFCC1Q9HA90 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
EFCC1Q9HA90 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
EFCC1Q9HA90 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.05■■■□□ 2.56
EFCC1Q9HA90 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
EFCC1Q9HA90 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.03■■■□□ 2.56
EFCC1Q9HA90 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC31.03■■■□□ 2.56
EFCC1Q9HA90 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
EFCC1Q9HA90 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
EFCC1Q9HA90 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
EFCC1Q9HA90 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
EFCC1Q9HA90 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
EFCC1Q9HA90 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31■■■□□ 2.55
EFCC1Q9HA90 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.99■■■□□ 2.55
EFCC1Q9HA90 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
EFCC1Q9HA90 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
EFCC1Q9HA90 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
EFCC1Q9HA90 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.97■■■□□ 2.55
EFCC1Q9HA90 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.97■■■□□ 2.55
EFCC1Q9HA90 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
EFCC1Q9HA90 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
EFCC1Q9HA90 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
EFCC1Q9HA90 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.95■■■□□ 2.55
EFCC1Q9HA90 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
EFCC1Q9HA90 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
EFCC1Q9HA90 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.94■■■□□ 2.54
EFCC1Q9HA90 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
EFCC1Q9HA90 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.92■■■□□ 2.54
EFCC1Q9HA90 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.91■■■□□ 2.54
EFCC1Q9HA90 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.91■■■□□ 2.54
EFCC1Q9HA90 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
EFCC1Q9HA90 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.89■■■□□ 2.54
EFCC1Q9HA90 RARRES2P2-201ENST00000394842 485 ntBASIC30.88■■■□□ 2.53
EFCC1Q9HA90 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.88■■■□□ 2.53
EFCC1Q9HA90 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
EFCC1Q9HA90 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
EFCC1Q9HA90 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
EFCC1Q9HA90 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.86■■■□□ 2.53
EFCC1Q9HA90 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.85■■■□□ 2.53
EFCC1Q9HA90 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
EFCC1Q9HA90 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
EFCC1Q9HA90 ABHD17AP5-201ENST00000580133 923 ntBASIC30.85■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms