Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
LRRC40Q9H9A6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
LRRC40Q9H9A6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.03■■□□□ 1.92
LRRC40Q9H9A6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
LRRC40Q9H9A6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.03■■□□□ 1.92
LRRC40Q9H9A6 ST7-AS1-201ENST00000456775 1889 ntBASIC27.02■■□□□ 1.92
LRRC40Q9H9A6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
LRRC40Q9H9A6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
LRRC40Q9H9A6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
LRRC40Q9H9A6 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC27.02■■□□□ 1.92
LRRC40Q9H9A6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
LRRC40Q9H9A6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27■■□□□ 1.91
LRRC40Q9H9A6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27■■□□□ 1.91
LRRC40Q9H9A6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
LRRC40Q9H9A6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
LRRC40Q9H9A6 AL135925.1-201ENST00000605920 1701 ntBASIC26.99■■□□□ 1.91
LRRC40Q9H9A6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.98■■□□□ 1.91
LRRC40Q9H9A6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.98■■□□□ 1.91
LRRC40Q9H9A6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
LRRC40Q9H9A6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
LRRC40Q9H9A6 ABCB10P3-201ENST00000561950 2166 ntBASIC26.97■■□□□ 1.91
LRRC40Q9H9A6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.97■■□□□ 1.91
LRRC40Q9H9A6 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
LRRC40Q9H9A6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
LRRC40Q9H9A6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
LRRC40Q9H9A6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
LRRC40Q9H9A6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
LRRC40Q9H9A6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
LRRC40Q9H9A6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
LRRC40Q9H9A6 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
LRRC40Q9H9A6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
LRRC40Q9H9A6 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LRRC40Q9H9A6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
LRRC40Q9H9A6 AC136428.2-201ENST00000563187 214 ntBASIC26.93■■□□□ 1.9
LRRC40Q9H9A6 AC097358.2-201ENST00000607541 1159 ntBASIC26.93■■□□□ 1.9
LRRC40Q9H9A6 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
LRRC40Q9H9A6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
LRRC40Q9H9A6 AL391121.1-201ENST00000607967 1349 ntBASIC26.91■■□□□ 1.9
LRRC40Q9H9A6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
LRRC40Q9H9A6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
LRRC40Q9H9A6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.9■■□□□ 1.9
LRRC40Q9H9A6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
LRRC40Q9H9A6 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
LRRC40Q9H9A6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.89■■□□□ 1.9
LRRC40Q9H9A6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
LRRC40Q9H9A6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.88■■□□□ 1.89
LRRC40Q9H9A6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
LRRC40Q9H9A6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
LRRC40Q9H9A6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
LRRC40Q9H9A6 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.87■■□□□ 1.89
LRRC40Q9H9A6 CAHM-201ENST00000604200 896 ntBASIC26.87■■□□□ 1.89
LRRC40Q9H9A6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
LRRC40Q9H9A6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
LRRC40Q9H9A6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
LRRC40Q9H9A6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.86■■□□□ 1.89
LRRC40Q9H9A6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
LRRC40Q9H9A6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LRRC40Q9H9A6 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LRRC40Q9H9A6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
LRRC40Q9H9A6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
LRRC40Q9H9A6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.83■■□□□ 1.89
LRRC40Q9H9A6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
LRRC40Q9H9A6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
LRRC40Q9H9A6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
LRRC40Q9H9A6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
LRRC40Q9H9A6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.81■■□□□ 1.88
LRRC40Q9H9A6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
LRRC40Q9H9A6 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
LRRC40Q9H9A6 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
LRRC40Q9H9A6 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
LRRC40Q9H9A6 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
LRRC40Q9H9A6 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
LRRC40Q9H9A6 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
LRRC40Q9H9A6 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
LRRC40Q9H9A6 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.79■■□□□ 1.88
LRRC40Q9H9A6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
LRRC40Q9H9A6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
LRRC40Q9H9A6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
LRRC40Q9H9A6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
LRRC40Q9H9A6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
LRRC40Q9H9A6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
LRRC40Q9H9A6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.77■■□□□ 1.88
LRRC40Q9H9A6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.77■■□□□ 1.88
LRRC40Q9H9A6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
LRRC40Q9H9A6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
LRRC40Q9H9A6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.76■■□□□ 1.87
LRRC40Q9H9A6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.75■■□□□ 1.87
LRRC40Q9H9A6 AC139426.1-201ENST00000568218 2529 ntBASIC26.75■■□□□ 1.87
LRRC40Q9H9A6 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
LRRC40Q9H9A6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
LRRC40Q9H9A6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
LRRC40Q9H9A6 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
LRRC40Q9H9A6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
LRRC40Q9H9A6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
LRRC40Q9H9A6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.73■■□□□ 1.87
LRRC40Q9H9A6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
LRRC40Q9H9A6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
LRRC40Q9H9A6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
LRRC40Q9H9A6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
LRRC40Q9H9A6 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms