Protein–RNA interactions for Protein: Q9BRN9

TM2D3, TM2 domain-containing protein 3, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3Q9BRN9 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TM2D3Q9BRN9 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM2D3Q9BRN9 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC19.55■□□□□ 0.72
TM2D3Q9BRN9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.54■□□□□ 0.72
TM2D3Q9BRN9 MIR6090-201ENST00000622481 60 ntBASIC19.54■□□□□ 0.72
TM2D3Q9BRN9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM2D3Q9BRN9 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM2D3Q9BRN9 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TM2D3Q9BRN9 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.52■□□□□ 0.72
TM2D3Q9BRN9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.52■□□□□ 0.72
TM2D3Q9BRN9 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TM2D3Q9BRN9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.51■□□□□ 0.71
TM2D3Q9BRN9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.5■□□□□ 0.71
TM2D3Q9BRN9 MIR3648-2-201ENST00000581792 180 ntBASIC19.5■□□□□ 0.71
TM2D3Q9BRN9 MIR3648-1-201ENST00000615959 180 ntBASIC19.5■□□□□ 0.71
TM2D3Q9BRN9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TM2D3Q9BRN9 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM2D3Q9BRN9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM2D3Q9BRN9 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM2D3Q9BRN9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
TM2D3Q9BRN9 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC19.48■□□□□ 0.71
TM2D3Q9BRN9 LINC01971-201ENST00000617888 1048 ntBASIC19.48■□□□□ 0.71
TM2D3Q9BRN9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.48■□□□□ 0.71
TM2D3Q9BRN9 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM2D3Q9BRN9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TM2D3Q9BRN9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.47■□□□□ 0.71
TM2D3Q9BRN9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.47■□□□□ 0.71
TM2D3Q9BRN9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.47■□□□□ 0.71
TM2D3Q9BRN9 AC016575.1-201ENST00000607026 382 ntBASIC19.47■□□□□ 0.71
TM2D3Q9BRN9 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TM2D3Q9BRN9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TM2D3Q9BRN9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM2D3Q9BRN9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.46■□□□□ 0.71
TM2D3Q9BRN9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.45■□□□□ 0.7
TM2D3Q9BRN9 DUX4L11-201ENST00000611504 1267 ntBASIC19.45■□□□□ 0.7
TM2D3Q9BRN9 DUX4L12-201ENST00000614593 1267 ntBASIC19.45■□□□□ 0.7
TM2D3Q9BRN9 DUX4L14-201ENST00000621227 1267 ntBASIC19.45■□□□□ 0.7
TM2D3Q9BRN9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM2D3Q9BRN9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TM2D3Q9BRN9 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC19.43■□□□□ 0.7
TM2D3Q9BRN9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM2D3Q9BRN9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM2D3Q9BRN9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM2D3Q9BRN9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM2D3Q9BRN9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TM2D3Q9BRN9 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM2D3Q9BRN9 CR559946.2-201ENST00000623684 991 ntBASIC19.41■□□□□ 0.7
TM2D3Q9BRN9 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TM2D3Q9BRN9 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM2D3Q9BRN9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
TM2D3Q9BRN9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TM2D3Q9BRN9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TM2D3Q9BRN9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TM2D3Q9BRN9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM2D3Q9BRN9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.38■□□□□ 0.69
TM2D3Q9BRN9 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.38■□□□□ 0.69
TM2D3Q9BRN9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.38■□□□□ 0.69
TM2D3Q9BRN9 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM2D3Q9BRN9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM2D3Q9BRN9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TM2D3Q9BRN9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.37■□□□□ 0.69
TM2D3Q9BRN9 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM2D3Q9BRN9 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM2D3Q9BRN9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM2D3Q9BRN9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM2D3Q9BRN9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.36■□□□□ 0.69
TM2D3Q9BRN9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.36■□□□□ 0.69
TM2D3Q9BRN9 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TM2D3Q9BRN9 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TM2D3Q9BRN9 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.36■□□□□ 0.69
TM2D3Q9BRN9 HSD17B1P1-201ENST00000590052 955 ntBASIC19.35■□□□□ 0.69
TM2D3Q9BRN9 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TM2D3Q9BRN9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TM2D3Q9BRN9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TM2D3Q9BRN9 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TM2D3Q9BRN9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TM2D3Q9BRN9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TM2D3Q9BRN9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.31■□□□□ 0.68
TM2D3Q9BRN9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM2D3Q9BRN9 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
TM2D3Q9BRN9 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM2D3Q9BRN9 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
TM2D3Q9BRN9 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TM2D3Q9BRN9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM2D3Q9BRN9 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC19.28■□□□□ 0.68
TM2D3Q9BRN9 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.27■□□□□ 0.68
TM2D3Q9BRN9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.27■□□□□ 0.68
TM2D3Q9BRN9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM2D3Q9BRN9 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TM2D3Q9BRN9 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TM2D3Q9BRN9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM2D3Q9BRN9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.26■□□□□ 0.67
TM2D3Q9BRN9 DUX4L13-201ENST00000554103 1267 ntBASIC19.26■□□□□ 0.67
TM2D3Q9BRN9 DUX4L15-201ENST00000611059 1267 ntBASIC19.26■□□□□ 0.67
TM2D3Q9BRN9 DUX4L23-201ENST00000615195 1269 ntBASIC19.26■□□□□ 0.67
TM2D3Q9BRN9 DUX4L24-201ENST00000617576 1269 ntBASIC19.26■□□□□ 0.67
TM2D3Q9BRN9 DUX4L22-201ENST00000618238 1269 ntBASIC19.26■□□□□ 0.67
TM2D3Q9BRN9 DUX4L20-201ENST00000619712 1269 ntBASIC19.26■□□□□ 0.67
TM2D3Q9BRN9 DUX4L21-201ENST00000622058 1269 ntBASIC19.26■□□□□ 0.67
TM2D3Q9BRN9 DUX4L10-201ENST00000622460 1267 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms