Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.67■□□□□ 0.9
DUX3Q96PT4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DUX3Q96PT4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.66■□□□□ 0.9
DUX3Q96PT4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DUX3Q96PT4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DUX3Q96PT4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DUX3Q96PT4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DUX3Q96PT4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DUX3Q96PT4 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DUX3Q96PT4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.64■□□□□ 0.9
DUX3Q96PT4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.64■□□□□ 0.89
DUX3Q96PT4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DUX3Q96PT4 ABHD17AP4-201ENST00000411545 909 ntBASIC20.64■□□□□ 0.89
DUX3Q96PT4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
DUX3Q96PT4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.64■□□□□ 0.89
DUX3Q96PT4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.64■□□□□ 0.89
DUX3Q96PT4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DUX3Q96PT4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DUX3Q96PT4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DUX3Q96PT4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DUX3Q96PT4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DUX3Q96PT4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.62■□□□□ 0.89
DUX3Q96PT4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DUX3Q96PT4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
DUX3Q96PT4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
DUX3Q96PT4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.6■□□□□ 0.89
DUX3Q96PT4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.6■□□□□ 0.89
DUX3Q96PT4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DUX3Q96PT4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DUX3Q96PT4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DUX3Q96PT4 MIR7108-201ENST00000614319 87 ntBASIC20.59■□□□□ 0.89
DUX3Q96PT4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
DUX3Q96PT4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.58■□□□□ 0.89
DUX3Q96PT4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
DUX3Q96PT4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.57■□□□□ 0.88
DUX3Q96PT4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.57■□□□□ 0.88
DUX3Q96PT4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.57■□□□□ 0.88
DUX3Q96PT4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.56■□□□□ 0.88
DUX3Q96PT4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.56■□□□□ 0.88
DUX3Q96PT4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DUX3Q96PT4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DUX3Q96PT4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DUX3Q96PT4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DUX3Q96PT4 AL161658.1-201ENST00000623641 1967 ntBASIC20.55■□□□□ 0.88
DUX3Q96PT4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DUX3Q96PT4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.54■□□□□ 0.88
DUX3Q96PT4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DUX3Q96PT4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DUX3Q96PT4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
DUX3Q96PT4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DUX3Q96PT4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.5■□□□□ 0.87
DUX3Q96PT4 MIR6090-201ENST00000622481 60 ntBASIC20.5■□□□□ 0.87
DUX3Q96PT4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.5■□□□□ 0.87
DUX3Q96PT4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DUX3Q96PT4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DUX3Q96PT4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DUX3Q96PT4 ZNRF2P2-203ENST00000454624 420 ntBASIC20.49■□□□□ 0.87
DUX3Q96PT4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DUX3Q96PT4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.48■□□□□ 0.87
DUX3Q96PT4 DUX4L29-201ENST00000425409 679 ntBASIC20.48■□□□□ 0.87
DUX3Q96PT4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DUX3Q96PT4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.47■□□□□ 0.87
DUX3Q96PT4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DUX3Q96PT4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
DUX3Q96PT4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DUX3Q96PT4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.46■□□□□ 0.87
DUX3Q96PT4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DUX3Q96PT4 AC108673.1-201ENST00000510422 1159 ntBASIC20.45■□□□□ 0.86
DUX3Q96PT4 AC021231.2-201ENST00000594613 730 ntBASIC20.45■□□□□ 0.86
DUX3Q96PT4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DUX3Q96PT4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DUX3Q96PT4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
DUX3Q96PT4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
DUX3Q96PT4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
DUX3Q96PT4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DUX3Q96PT4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
DUX3Q96PT4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DUX3Q96PT4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DUX3Q96PT4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.43■□□□□ 0.86
DUX3Q96PT4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.43■□□□□ 0.86
DUX3Q96PT4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.42■□□□□ 0.86
DUX3Q96PT4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DUX3Q96PT4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DUX3Q96PT4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.42■□□□□ 0.86
DUX3Q96PT4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
DUX3Q96PT4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DUX3Q96PT4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
DUX3Q96PT4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
DUX3Q96PT4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
DUX3Q96PT4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.41■□□□□ 0.86
DUX3Q96PT4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DUX3Q96PT4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DUX3Q96PT4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DUX3Q96PT4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DUX3Q96PT4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.4■□□□□ 0.86
DUX3Q96PT4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DUX3Q96PT4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.4■□□□□ 0.86
DUX3Q96PT4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC20.39■□□□□ 0.86
DUX3Q96PT4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
DUX3Q96PT4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms