Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.17■■□□□ 1.3
SPG11Q96JI7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.16■■□□□ 1.3
SPG11Q96JI7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
SPG11Q96JI7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SPG11Q96JI7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SPG11Q96JI7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.14■■□□□ 1.3
SPG11Q96JI7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SPG11Q96JI7 LINC01971-201ENST00000617888 1048 ntBASIC23.13■■□□□ 1.29
SPG11Q96JI7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SPG11Q96JI7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SPG11Q96JI7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.12■■□□□ 1.29
SPG11Q96JI7 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
SPG11Q96JI7 AC108673.1-201ENST00000510422 1159 ntBASIC23.11■■□□□ 1.29
SPG11Q96JI7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SPG11Q96JI7 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.1■■□□□ 1.29
SPG11Q96JI7 MIR6090-201ENST00000622481 60 ntBASIC23.1■■□□□ 1.29
SPG11Q96JI7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SPG11Q96JI7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
SPG11Q96JI7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SPG11Q96JI7 DUX4L11-201ENST00000611504 1267 ntBASIC23.08■■□□□ 1.29
SPG11Q96JI7 DUX4L12-201ENST00000614593 1267 ntBASIC23.08■■□□□ 1.29
SPG11Q96JI7 DUX4L14-201ENST00000621227 1267 ntBASIC23.08■■□□□ 1.29
SPG11Q96JI7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.08■■□□□ 1.28
SPG11Q96JI7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SPG11Q96JI7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.07■■□□□ 1.28
SPG11Q96JI7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SPG11Q96JI7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SPG11Q96JI7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SPG11Q96JI7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SPG11Q96JI7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.04■■□□□ 1.28
SPG11Q96JI7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
SPG11Q96JI7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SPG11Q96JI7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SPG11Q96JI7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.03■■□□□ 1.28
SPG11Q96JI7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SPG11Q96JI7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.02■■□□□ 1.28
SPG11Q96JI7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
SPG11Q96JI7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SPG11Q96JI7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
SPG11Q96JI7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SPG11Q96JI7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SPG11Q96JI7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SPG11Q96JI7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.99■■□□□ 1.27
SPG11Q96JI7 RARRES2P2-201ENST00000394842 485 ntBASIC22.98■■□□□ 1.27
SPG11Q96JI7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.98■■□□□ 1.27
SPG11Q96JI7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SPG11Q96JI7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.97■■□□□ 1.27
SPG11Q96JI7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.97■■□□□ 1.27
SPG11Q96JI7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SPG11Q96JI7 DUX4L13-201ENST00000554103 1267 ntBASIC22.96■■□□□ 1.27
SPG11Q96JI7 DUX4L15-201ENST00000611059 1267 ntBASIC22.96■■□□□ 1.27
SPG11Q96JI7 DUX4L23-201ENST00000615195 1269 ntBASIC22.96■■□□□ 1.27
SPG11Q96JI7 DUX4L24-201ENST00000617576 1269 ntBASIC22.96■■□□□ 1.27
SPG11Q96JI7 DUX4L22-201ENST00000618238 1269 ntBASIC22.96■■□□□ 1.27
SPG11Q96JI7 DUX4L20-201ENST00000619712 1269 ntBASIC22.96■■□□□ 1.27
SPG11Q96JI7 DUX4L21-201ENST00000622058 1269 ntBASIC22.96■■□□□ 1.27
SPG11Q96JI7 DUX4L10-201ENST00000622460 1267 ntBASIC22.96■■□□□ 1.27
SPG11Q96JI7 DUX4L25-201ENST00000624915 1269 ntBASIC22.96■■□□□ 1.27
SPG11Q96JI7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SPG11Q96JI7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SPG11Q96JI7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.94■■□□□ 1.26
SPG11Q96JI7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SPG11Q96JI7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.94■■□□□ 1.26
SPG11Q96JI7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
SPG11Q96JI7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.93■■□□□ 1.26
SPG11Q96JI7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SPG11Q96JI7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC22.92■■□□□ 1.26
SPG11Q96JI7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SPG11Q96JI7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SPG11Q96JI7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC22.91■■□□□ 1.26
SPG11Q96JI7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
SPG11Q96JI7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SPG11Q96JI7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SPG11Q96JI7 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC22.88■■□□□ 1.25
SPG11Q96JI7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SPG11Q96JI7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC22.87■■□□□ 1.25
SPG11Q96JI7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SPG11Q96JI7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SPG11Q96JI7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.86■■□□□ 1.25
SPG11Q96JI7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.86■■□□□ 1.25
SPG11Q96JI7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SPG11Q96JI7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC22.85■■□□□ 1.25
SPG11Q96JI7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC22.85■■□□□ 1.25
SPG11Q96JI7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SPG11Q96JI7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SPG11Q96JI7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SPG11Q96JI7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
SPG11Q96JI7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.83■■□□□ 1.25
SPG11Q96JI7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
SPG11Q96JI7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
SPG11Q96JI7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SPG11Q96JI7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SPG11Q96JI7 ABHD17AP5-201ENST00000580133 923 ntBASIC22.82■■□□□ 1.24
SPG11Q96JI7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SPG11Q96JI7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC22.82■■□□□ 1.24
SPG11Q96JI7 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SPG11Q96JI7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
SPG11Q96JI7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
SPG11Q96JI7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC22.81■■□□□ 1.24
SPG11Q96JI7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms