Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
HPS1Q92902 MVK-208ENST00000539696 608 ntTSL 5 BASIC23.88■■□□□ 1.41
HPS1Q92902 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.88■■□□□ 1.41
HPS1Q92902 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
HPS1Q92902 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HPS1Q92902 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
HPS1Q92902 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HPS1Q92902 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HPS1Q92902 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HPS1Q92902 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HPS1Q92902 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
HPS1Q92902 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HPS1Q92902 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
HPS1Q92902 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.85■■□□□ 1.41
HPS1Q92902 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
HPS1Q92902 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HPS1Q92902 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
HPS1Q92902 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
HPS1Q92902 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HPS1Q92902 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
HPS1Q92902 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HPS1Q92902 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HPS1Q92902 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.81■■□□□ 1.4
HPS1Q92902 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.81■■□□□ 1.4
HPS1Q92902 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HPS1Q92902 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.8■■□□□ 1.4
HPS1Q92902 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
HPS1Q92902 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
HPS1Q92902 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HPS1Q92902 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
HPS1Q92902 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HPS1Q92902 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HPS1Q92902 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HPS1Q92902 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
HPS1Q92902 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HPS1Q92902 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.79■■□□□ 1.4
HPS1Q92902 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HPS1Q92902 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.78■■□□□ 1.4
HPS1Q92902 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.78■■□□□ 1.4
HPS1Q92902 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HPS1Q92902 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
HPS1Q92902 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HPS1Q92902 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.75■■□□□ 1.39
HPS1Q92902 KLF16-203ENST00000592313 508 ntTSL 3 BASIC23.75■■□□□ 1.39
HPS1Q92902 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.75■■□□□ 1.39
HPS1Q92902 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.75■■□□□ 1.39
HPS1Q92902 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.75■■□□□ 1.39
HPS1Q92902 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HPS1Q92902 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC23.74■■□□□ 1.39
HPS1Q92902 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
HPS1Q92902 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HPS1Q92902 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.73■■□□□ 1.39
HPS1Q92902 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.73■■□□□ 1.39
HPS1Q92902 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HPS1Q92902 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
HPS1Q92902 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HPS1Q92902 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.71■■□□□ 1.39
HPS1Q92902 AC097358.2-201ENST00000607541 1159 ntBASIC23.7■■□□□ 1.38
HPS1Q92902 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
HPS1Q92902 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23.69■■□□□ 1.38
HPS1Q92902 SETD8P1-201ENST00000623146 1180 ntBASIC23.69■■□□□ 1.38
HPS1Q92902 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HPS1Q92902 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.69■■□□□ 1.38
HPS1Q92902 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HPS1Q92902 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HPS1Q92902 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC23.67■■□□□ 1.38
HPS1Q92902 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC23.66■■□□□ 1.38
HPS1Q92902 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.66■■□□□ 1.38
HPS1Q92902 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC23.66■■□□□ 1.38
HPS1Q92902 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
HPS1Q92902 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HPS1Q92902 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.65■■□□□ 1.38
HPS1Q92902 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
HPS1Q92902 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HPS1Q92902 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
HPS1Q92902 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.64■■□□□ 1.37
HPS1Q92902 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
HPS1Q92902 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
HPS1Q92902 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.63■■□□□ 1.37
HPS1Q92902 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
HPS1Q92902 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.63■■□□□ 1.37
HPS1Q92902 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.61■■□□□ 1.37
HPS1Q92902 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.61■■□□□ 1.37
HPS1Q92902 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
HPS1Q92902 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.6■■□□□ 1.37
HPS1Q92902 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HPS1Q92902 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HPS1Q92902 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HPS1Q92902 AC136428.2-201ENST00000563187 214 ntBASIC23.59■■□□□ 1.37
HPS1Q92902 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
HPS1Q92902 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC23.59■■□□□ 1.37
HPS1Q92902 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.58■■□□□ 1.37
HPS1Q92902 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.57■■□□□ 1.36
HPS1Q92902 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
HPS1Q92902 AC142086.6-201ENST00000621154 1765 ntBASIC23.56■■□□□ 1.36
HPS1Q92902 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
HPS1Q92902 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
HPS1Q92902 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.56■■□□□ 1.36
HPS1Q92902 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
HPS1Q92902 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms