Protein–RNA interactions for Protein: Q8WXA9

SREK1, Splicing regulatory glutamine/lysine-rich protein 1, humanhuman

Known RBP Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1Q8WXA9 AL161658.1-201ENST00000623641 1967 ntBASIC26.46■■□□□ 1.83
SREK1Q8WXA9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
SREK1Q8WXA9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.45■■□□□ 1.83
SREK1Q8WXA9 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
SREK1Q8WXA9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.45■■□□□ 1.82
SREK1Q8WXA9 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SREK1Q8WXA9 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
SREK1Q8WXA9 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SREK1Q8WXA9 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.44■■□□□ 1.82
SREK1Q8WXA9 AC139426.1-201ENST00000568218 2529 ntBASIC26.43■■□□□ 1.82
SREK1Q8WXA9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
SREK1Q8WXA9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SREK1Q8WXA9 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SREK1Q8WXA9 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
SREK1Q8WXA9 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SREK1Q8WXA9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SREK1Q8WXA9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
SREK1Q8WXA9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.39■■□□□ 1.82
SREK1Q8WXA9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
SREK1Q8WXA9 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SREK1Q8WXA9 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SREK1Q8WXA9 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SREK1Q8WXA9 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SREK1Q8WXA9 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SREK1Q8WXA9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.36■■□□□ 1.81
SREK1Q8WXA9 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
SREK1Q8WXA9 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SREK1Q8WXA9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.35■■□□□ 1.81
SREK1Q8WXA9 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
SREK1Q8WXA9 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
SREK1Q8WXA9 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SREK1Q8WXA9 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SREK1Q8WXA9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.32■■□□□ 1.8
SREK1Q8WXA9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.32■■□□□ 1.8
SREK1Q8WXA9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SREK1Q8WXA9 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
SREK1Q8WXA9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.3■■□□□ 1.8
SREK1Q8WXA9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SREK1Q8WXA9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SREK1Q8WXA9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
SREK1Q8WXA9 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SREK1Q8WXA9 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SREK1Q8WXA9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.26■■□□□ 1.79
SREK1Q8WXA9 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
SREK1Q8WXA9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SREK1Q8WXA9 AL135925.1-201ENST00000605920 1701 ntBASIC26.24■■□□□ 1.79
SREK1Q8WXA9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SREK1Q8WXA9 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SREK1Q8WXA9 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SREK1Q8WXA9 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SREK1Q8WXA9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.22■■□□□ 1.79
SREK1Q8WXA9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SREK1Q8WXA9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SREK1Q8WXA9 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
SREK1Q8WXA9 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SREK1Q8WXA9 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SREK1Q8WXA9 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.79
SREK1Q8WXA9 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SREK1Q8WXA9 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SREK1Q8WXA9 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
SREK1Q8WXA9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
SREK1Q8WXA9 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SREK1Q8WXA9 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SREK1Q8WXA9 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
SREK1Q8WXA9 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SREK1Q8WXA9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SREK1Q8WXA9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SREK1Q8WXA9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SREK1Q8WXA9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SREK1Q8WXA9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.13■■□□□ 1.77
SREK1Q8WXA9 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.13■■□□□ 1.77
SREK1Q8WXA9 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
SREK1Q8WXA9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.12■■□□□ 1.77
SREK1Q8WXA9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.12■■□□□ 1.77
SREK1Q8WXA9 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SREK1Q8WXA9 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SREK1Q8WXA9 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.1■■□□□ 1.77
SREK1Q8WXA9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SREK1Q8WXA9 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
SREK1Q8WXA9 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SREK1Q8WXA9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.09■■□□□ 1.77
SREK1Q8WXA9 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SREK1Q8WXA9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
SREK1Q8WXA9 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.07■■□□□ 1.76
SREK1Q8WXA9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SREK1Q8WXA9 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
SREK1Q8WXA9 AC142086.6-201ENST00000621154 1765 ntBASIC26.07■■□□□ 1.76
SREK1Q8WXA9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SREK1Q8WXA9 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SREK1Q8WXA9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.06■■□□□ 1.76
SREK1Q8WXA9 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.06■■□□□ 1.76
SREK1Q8WXA9 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SREK1Q8WXA9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SREK1Q8WXA9 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SREK1Q8WXA9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.04■■□□□ 1.76
SREK1Q8WXA9 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SREK1Q8WXA9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
SREK1Q8WXA9 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SREK1Q8WXA9 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
SREK1Q8WXA9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms