Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
SMARCC2Q8TAQ2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.31■■■□□ 2.6
SMARCC2Q8TAQ2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SMARCC2Q8TAQ2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.3■■■□□ 2.6
SMARCC2Q8TAQ2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SMARCC2Q8TAQ2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SMARCC2Q8TAQ2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.28■■■□□ 2.6
SMARCC2Q8TAQ2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
SMARCC2Q8TAQ2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SMARCC2Q8TAQ2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
SMARCC2Q8TAQ2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SMARCC2Q8TAQ2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
SMARCC2Q8TAQ2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SMARCC2Q8TAQ2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
SMARCC2Q8TAQ2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
SMARCC2Q8TAQ2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
SMARCC2Q8TAQ2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.25■■■□□ 2.59
SMARCC2Q8TAQ2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SMARCC2Q8TAQ2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
SMARCC2Q8TAQ2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.23■■■□□ 2.59
SMARCC2Q8TAQ2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.23■■■□□ 2.59
SMARCC2Q8TAQ2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SMARCC2Q8TAQ2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
SMARCC2Q8TAQ2 ST7-AS1-201ENST00000456775 1889 ntBASIC31.21■■■□□ 2.59
SMARCC2Q8TAQ2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SMARCC2Q8TAQ2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SMARCC2Q8TAQ2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SMARCC2Q8TAQ2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SMARCC2Q8TAQ2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
SMARCC2Q8TAQ2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SMARCC2Q8TAQ2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SMARCC2Q8TAQ2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
SMARCC2Q8TAQ2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
SMARCC2Q8TAQ2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SMARCC2Q8TAQ2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SMARCC2Q8TAQ2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SMARCC2Q8TAQ2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SMARCC2Q8TAQ2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SMARCC2Q8TAQ2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SMARCC2Q8TAQ2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.17■■■□□ 2.58
SMARCC2Q8TAQ2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
SMARCC2Q8TAQ2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
SMARCC2Q8TAQ2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SMARCC2Q8TAQ2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
SMARCC2Q8TAQ2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
SMARCC2Q8TAQ2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
SMARCC2Q8TAQ2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SMARCC2Q8TAQ2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
SMARCC2Q8TAQ2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SMARCC2Q8TAQ2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.12■■■□□ 2.57
SMARCC2Q8TAQ2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SMARCC2Q8TAQ2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SMARCC2Q8TAQ2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SMARCC2Q8TAQ2 AL135925.1-201ENST00000605920 1701 ntBASIC31.12■■■□□ 2.57
SMARCC2Q8TAQ2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SMARCC2Q8TAQ2 ABCB10P3-201ENST00000561950 2166 ntBASIC31.1■■■□□ 2.57
SMARCC2Q8TAQ2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.09■■■□□ 2.57
SMARCC2Q8TAQ2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCC2Q8TAQ2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCC2Q8TAQ2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCC2Q8TAQ2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.09■■■□□ 2.57
SMARCC2Q8TAQ2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCC2Q8TAQ2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SMARCC2Q8TAQ2 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.07■■■□□ 2.56
SMARCC2Q8TAQ2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.06■■■□□ 2.56
SMARCC2Q8TAQ2 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.06■■■□□ 2.56
SMARCC2Q8TAQ2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
SMARCC2Q8TAQ2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SMARCC2Q8TAQ2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SMARCC2Q8TAQ2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.03■■■□□ 2.56
SMARCC2Q8TAQ2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SMARCC2Q8TAQ2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
SMARCC2Q8TAQ2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
SMARCC2Q8TAQ2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
SMARCC2Q8TAQ2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SMARCC2Q8TAQ2 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
SMARCC2Q8TAQ2 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.99■■■□□ 2.55
SMARCC2Q8TAQ2 AP006261.1-201ENST00000584783 668 ntBASIC30.99■■■□□ 2.55
SMARCC2Q8TAQ2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.99■■■□□ 2.55
SMARCC2Q8TAQ2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SMARCC2Q8TAQ2 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SMARCC2Q8TAQ2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SMARCC2Q8TAQ2 MIR762-201ENST00000390236 83 ntBASIC30.97■■■□□ 2.55
SMARCC2Q8TAQ2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
SMARCC2Q8TAQ2 RPS2P35-201ENST00000443417 897 ntBASIC30.96■■■□□ 2.55
SMARCC2Q8TAQ2 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.96■■■□□ 2.55
SMARCC2Q8TAQ2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
SMARCC2Q8TAQ2 AL162393.1-201ENST00000437852 946 ntBASIC30.95■■■□□ 2.55
SMARCC2Q8TAQ2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SMARCC2Q8TAQ2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.93■■■□□ 2.54
SMARCC2Q8TAQ2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.93■■■□□ 2.54
SMARCC2Q8TAQ2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
SMARCC2Q8TAQ2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.93■■■□□ 2.54
SMARCC2Q8TAQ2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SMARCC2Q8TAQ2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SMARCC2Q8TAQ2 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SMARCC2Q8TAQ2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SMARCC2Q8TAQ2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
SMARCC2Q8TAQ2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.91■■■□□ 2.54
SMARCC2Q8TAQ2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.91■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms