Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
C11orf42Q8N5U0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
C11orf42Q8N5U0 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
C11orf42Q8N5U0 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.98■■□□□ 1.11
C11orf42Q8N5U0 MIR762-201ENST00000390236 83 ntBASIC21.98■■□□□ 1.11
C11orf42Q8N5U0 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.98■■□□□ 1.11
C11orf42Q8N5U0 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
C11orf42Q8N5U0 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.98■■□□□ 1.11
C11orf42Q8N5U0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.97■■□□□ 1.11
C11orf42Q8N5U0 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.97■■□□□ 1.11
C11orf42Q8N5U0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
C11orf42Q8N5U0 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.97■■□□□ 1.11
C11orf42Q8N5U0 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
C11orf42Q8N5U0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
C11orf42Q8N5U0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
C11orf42Q8N5U0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.96■■□□□ 1.11
C11orf42Q8N5U0 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
C11orf42Q8N5U0 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
C11orf42Q8N5U0 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
C11orf42Q8N5U0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.95■■□□□ 1.1
C11orf42Q8N5U0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
C11orf42Q8N5U0 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
C11orf42Q8N5U0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.94■■□□□ 1.1
C11orf42Q8N5U0 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
C11orf42Q8N5U0 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
C11orf42Q8N5U0 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
C11orf42Q8N5U0 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
C11orf42Q8N5U0 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
C11orf42Q8N5U0 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
C11orf42Q8N5U0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
C11orf42Q8N5U0 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
C11orf42Q8N5U0 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
C11orf42Q8N5U0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
C11orf42Q8N5U0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
C11orf42Q8N5U0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
C11orf42Q8N5U0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
C11orf42Q8N5U0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
C11orf42Q8N5U0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
C11orf42Q8N5U0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
C11orf42Q8N5U0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.9■■□□□ 1.1
C11orf42Q8N5U0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
C11orf42Q8N5U0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.9■■□□□ 1.1
C11orf42Q8N5U0 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
C11orf42Q8N5U0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
C11orf42Q8N5U0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
C11orf42Q8N5U0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
C11orf42Q8N5U0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.89■■□□□ 1.09
C11orf42Q8N5U0 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.89■■□□□ 1.09
C11orf42Q8N5U0 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
C11orf42Q8N5U0 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.87■■□□□ 1.09
C11orf42Q8N5U0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.87■■□□□ 1.09
C11orf42Q8N5U0 AP006261.1-201ENST00000584783 668 ntBASIC21.87■■□□□ 1.09
C11orf42Q8N5U0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
C11orf42Q8N5U0 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
C11orf42Q8N5U0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
C11orf42Q8N5U0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.86■■□□□ 1.09
C11orf42Q8N5U0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.85■■□□□ 1.09
C11orf42Q8N5U0 AC005559.1-201ENST00000589661 871 ntBASIC21.85■■□□□ 1.09
C11orf42Q8N5U0 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
C11orf42Q8N5U0 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
C11orf42Q8N5U0 DUX4L28-201ENST00000623687 678 ntBASIC21.84■■□□□ 1.09
C11orf42Q8N5U0 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
C11orf42Q8N5U0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.83■■□□□ 1.09
C11orf42Q8N5U0 AL162393.1-201ENST00000437852 946 ntBASIC21.83■■□□□ 1.09
C11orf42Q8N5U0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.83■■□□□ 1.09
C11orf42Q8N5U0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
C11orf42Q8N5U0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
C11orf42Q8N5U0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
C11orf42Q8N5U0 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.82■■□□□ 1.08
C11orf42Q8N5U0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
C11orf42Q8N5U0 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
C11orf42Q8N5U0 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
C11orf42Q8N5U0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
C11orf42Q8N5U0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
C11orf42Q8N5U0 MIR3665-201ENST00000578708 105 ntBASIC21.81■■□□□ 1.08
C11orf42Q8N5U0 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
C11orf42Q8N5U0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
C11orf42Q8N5U0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C11orf42Q8N5U0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C11orf42Q8N5U0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
C11orf42Q8N5U0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
C11orf42Q8N5U0 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
C11orf42Q8N5U0 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
C11orf42Q8N5U0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
C11orf42Q8N5U0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.76■■□□□ 1.07
C11orf42Q8N5U0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.76■■□□□ 1.07
C11orf42Q8N5U0 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
C11orf42Q8N5U0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.75■■□□□ 1.07
C11orf42Q8N5U0 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
C11orf42Q8N5U0 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
C11orf42Q8N5U0 AL135925.1-201ENST00000605920 1701 ntBASIC21.74■■□□□ 1.07
C11orf42Q8N5U0 AC087741.3-201ENST00000624270 1347 ntBASIC21.74■■□□□ 1.07
C11orf42Q8N5U0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.73■■□□□ 1.07
C11orf42Q8N5U0 RPS2P35-201ENST00000443417 897 ntBASIC21.73■■□□□ 1.07
C11orf42Q8N5U0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
C11orf42Q8N5U0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
C11orf42Q8N5U0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
C11orf42Q8N5U0 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
C11orf42Q8N5U0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
C11orf42Q8N5U0 AC139426.1-201ENST00000568218 2529 ntBASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms