Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SYNPOQ8N3V7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC27.4■■□□□ 1.98
SYNPOQ8N3V7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
SYNPOQ8N3V7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
SYNPOQ8N3V7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
SYNPOQ8N3V7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
SYNPOQ8N3V7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SYNPOQ8N3V7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.37■■□□□ 1.97
SYNPOQ8N3V7 MIR3648-2-201ENST00000581792 180 ntBASIC27.37■■□□□ 1.97
SYNPOQ8N3V7 MIR3648-1-201ENST00000615959 180 ntBASIC27.37■■□□□ 1.97
SYNPOQ8N3V7 MIR6090-201ENST00000622481 60 ntBASIC27.37■■□□□ 1.97
SYNPOQ8N3V7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.36■■□□□ 1.97
SYNPOQ8N3V7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC27.36■■□□□ 1.97
SYNPOQ8N3V7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.36■■□□□ 1.97
SYNPOQ8N3V7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SYNPOQ8N3V7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.35■■□□□ 1.97
SYNPOQ8N3V7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC27.35■■□□□ 1.97
SYNPOQ8N3V7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.35■■□□□ 1.97
SYNPOQ8N3V7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SYNPOQ8N3V7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SYNPOQ8N3V7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.33■■□□□ 1.97
SYNPOQ8N3V7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
SYNPOQ8N3V7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.33■■□□□ 1.97
SYNPOQ8N3V7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.33■■□□□ 1.97
SYNPOQ8N3V7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.32■■□□□ 1.96
SYNPOQ8N3V7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.32■■□□□ 1.96
SYNPOQ8N3V7 LINC01971-201ENST00000617888 1048 ntBASIC27.32■■□□□ 1.96
SYNPOQ8N3V7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SYNPOQ8N3V7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SYNPOQ8N3V7 AC016575.1-201ENST00000607026 382 ntBASIC27.3■■□□□ 1.96
SYNPOQ8N3V7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
SYNPOQ8N3V7 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.3■■□□□ 1.96
SYNPOQ8N3V7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SYNPOQ8N3V7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SYNPOQ8N3V7 DUX4L11-201ENST00000611504 1267 ntBASIC27.28■■□□□ 1.96
SYNPOQ8N3V7 DUX4L12-201ENST00000614593 1267 ntBASIC27.28■■□□□ 1.96
SYNPOQ8N3V7 DUX4L14-201ENST00000621227 1267 ntBASIC27.28■■□□□ 1.96
SYNPOQ8N3V7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
SYNPOQ8N3V7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
SYNPOQ8N3V7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
SYNPOQ8N3V7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.27■■□□□ 1.96
SYNPOQ8N3V7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
SYNPOQ8N3V7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SYNPOQ8N3V7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC27.26■■□□□ 1.95
SYNPOQ8N3V7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SYNPOQ8N3V7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SYNPOQ8N3V7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SYNPOQ8N3V7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.24■■□□□ 1.95
SYNPOQ8N3V7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SYNPOQ8N3V7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SYNPOQ8N3V7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SYNPOQ8N3V7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
SYNPOQ8N3V7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SYNPOQ8N3V7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
SYNPOQ8N3V7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SYNPOQ8N3V7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SYNPOQ8N3V7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SYNPOQ8N3V7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
SYNPOQ8N3V7 CR559946.2-201ENST00000623684 991 ntBASIC27.2■■□□□ 1.94
SYNPOQ8N3V7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.2■■□□□ 1.94
SYNPOQ8N3V7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SYNPOQ8N3V7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.19■■□□□ 1.94
SYNPOQ8N3V7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.19■■□□□ 1.94
SYNPOQ8N3V7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.19■■□□□ 1.94
SYNPOQ8N3V7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SYNPOQ8N3V7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SYNPOQ8N3V7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
SYNPOQ8N3V7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.17■■□□□ 1.94
SYNPOQ8N3V7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SYNPOQ8N3V7 HSD17B1P1-201ENST00000590052 955 ntBASIC27.16■■□□□ 1.94
SYNPOQ8N3V7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SYNPOQ8N3V7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.16■■□□□ 1.94
SYNPOQ8N3V7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.13■■□□□ 1.93
SYNPOQ8N3V7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SYNPOQ8N3V7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.11■■□□□ 1.93
SYNPOQ8N3V7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SYNPOQ8N3V7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SYNPOQ8N3V7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SYNPOQ8N3V7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SYNPOQ8N3V7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.09■■□□□ 1.93
SYNPOQ8N3V7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
SYNPOQ8N3V7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
SYNPOQ8N3V7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
SYNPOQ8N3V7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.09■■□□□ 1.93
SYNPOQ8N3V7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
SYNPOQ8N3V7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
SYNPOQ8N3V7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
SYNPOQ8N3V7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
SYNPOQ8N3V7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SYNPOQ8N3V7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.05■■□□□ 1.92
SYNPOQ8N3V7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.05■■□□□ 1.92
SYNPOQ8N3V7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SYNPOQ8N3V7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.03■■□□□ 1.92
SYNPOQ8N3V7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SYNPOQ8N3V7 ABHD17AP3-201ENST00000503096 1137 ntBASIC27.02■■□□□ 1.92
SYNPOQ8N3V7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC27.02■■□□□ 1.92
SYNPOQ8N3V7 DUX4L13-201ENST00000554103 1267 ntBASIC27.02■■□□□ 1.92
SYNPOQ8N3V7 DUX4L15-201ENST00000611059 1267 ntBASIC27.02■■□□□ 1.92
SYNPOQ8N3V7 DUX4L23-201ENST00000615195 1269 ntBASIC27.02■■□□□ 1.92
SYNPOQ8N3V7 DUX4L24-201ENST00000617576 1269 ntBASIC27.02■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms