Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
HIST3H2BBQ8N257 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
HIST3H2BBQ8N257 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
HIST3H2BBQ8N257 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.39■□□□□ 0.86
HIST3H2BBQ8N257 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HIST3H2BBQ8N257 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HIST3H2BBQ8N257 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
HIST3H2BBQ8N257 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIST3H2BBQ8N257 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
HIST3H2BBQ8N257 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIST3H2BBQ8N257 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HIST3H2BBQ8N257 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HIST3H2BBQ8N257 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
HIST3H2BBQ8N257 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
HIST3H2BBQ8N257 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST3H2BBQ8N257 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIST3H2BBQ8N257 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HIST3H2BBQ8N257 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIST3H2BBQ8N257 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.35■□□□□ 0.85
HIST3H2BBQ8N257 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
HIST3H2BBQ8N257 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIST3H2BBQ8N257 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.34■□□□□ 0.85
HIST3H2BBQ8N257 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
HIST3H2BBQ8N257 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HIST3H2BBQ8N257 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.33■□□□□ 0.84
HIST3H2BBQ8N257 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIST3H2BBQ8N257 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIST3H2BBQ8N257 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HIST3H2BBQ8N257 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIST3H2BBQ8N257 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HIST3H2BBQ8N257 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HIST3H2BBQ8N257 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HIST3H2BBQ8N257 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HIST3H2BBQ8N257 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HIST3H2BBQ8N257 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIST3H2BBQ8N257 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIST3H2BBQ8N257 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIST3H2BBQ8N257 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HIST3H2BBQ8N257 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIST3H2BBQ8N257 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.26■□□□□ 0.83
HIST3H2BBQ8N257 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIST3H2BBQ8N257 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST3H2BBQ8N257 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST3H2BBQ8N257 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST3H2BBQ8N257 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HIST3H2BBQ8N257 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
HIST3H2BBQ8N257 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HIST3H2BBQ8N257 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST3H2BBQ8N257 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST3H2BBQ8N257 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST3H2BBQ8N257 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST3H2BBQ8N257 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST3H2BBQ8N257 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
HIST3H2BBQ8N257 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.22■□□□□ 0.83
HIST3H2BBQ8N257 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIST3H2BBQ8N257 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HIST3H2BBQ8N257 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
HIST3H2BBQ8N257 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HIST3H2BBQ8N257 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST3H2BBQ8N257 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
HIST3H2BBQ8N257 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST3H2BBQ8N257 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.18■□□□□ 0.82
HIST3H2BBQ8N257 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST3H2BBQ8N257 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST3H2BBQ8N257 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
HIST3H2BBQ8N257 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST3H2BBQ8N257 AC120057.4-201ENST00000624722 1615 ntBASIC20.16■□□□□ 0.82
HIST3H2BBQ8N257 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST3H2BBQ8N257 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST3H2BBQ8N257 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST3H2BBQ8N257 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.15■□□□□ 0.82
HIST3H2BBQ8N257 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST3H2BBQ8N257 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST3H2BBQ8N257 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.15■□□□□ 0.82
HIST3H2BBQ8N257 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST3H2BBQ8N257 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST3H2BBQ8N257 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
HIST3H2BBQ8N257 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
HIST3H2BBQ8N257 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
HIST3H2BBQ8N257 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
HIST3H2BBQ8N257 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIST3H2BBQ8N257 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HIST3H2BBQ8N257 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIST3H2BBQ8N257 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HIST3H2BBQ8N257 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HIST3H2BBQ8N257 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIST3H2BBQ8N257 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
HIST3H2BBQ8N257 ST7-AS1-201ENST00000456775 1889 ntBASIC20.12■□□□□ 0.81
HIST3H2BBQ8N257 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIST3H2BBQ8N257 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIST3H2BBQ8N257 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HIST3H2BBQ8N257 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST3H2BBQ8N257 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
HIST3H2BBQ8N257 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
HIST3H2BBQ8N257 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST3H2BBQ8N257 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.11■□□□□ 0.81
HIST3H2BBQ8N257 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HIST3H2BBQ8N257 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
HIST3H2BBQ8N257 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIST3H2BBQ8N257 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 8 ms