Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AL031258.1-201ENST00000623562 325 ntBASIC17.88■□□□□ 0.45
LINC01561Q8N1V8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
LINC01561Q8N1V8 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01561Q8N1V8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LINC01561Q8N1V8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
LINC01561Q8N1V8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01561Q8N1V8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01561Q8N1V8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
LINC01561Q8N1V8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC17.86■□□□□ 0.45
LINC01561Q8N1V8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01561Q8N1V8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC17.85■□□□□ 0.45
LINC01561Q8N1V8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC17.85■□□□□ 0.45
LINC01561Q8N1V8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
LINC01561Q8N1V8 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC17.85■□□□□ 0.45
LINC01561Q8N1V8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01561Q8N1V8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01561Q8N1V8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC17.84■□□□□ 0.45
LINC01561Q8N1V8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01561Q8N1V8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01561Q8N1V8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01561Q8N1V8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01561Q8N1V8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01561Q8N1V8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01561Q8N1V8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01561Q8N1V8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01561Q8N1V8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC01561Q8N1V8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01561Q8N1V8 AC142086.6-201ENST00000621154 1765 ntBASIC17.79■□□□□ 0.44
LINC01561Q8N1V8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01561Q8N1V8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01561Q8N1V8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC17.77■□□□□ 0.44
LINC01561Q8N1V8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LINC01561Q8N1V8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LINC01561Q8N1V8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01561Q8N1V8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01561Q8N1V8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC17.74■□□□□ 0.43
LINC01561Q8N1V8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC17.74■□□□□ 0.43
LINC01561Q8N1V8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01561Q8N1V8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LINC01561Q8N1V8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC17.74■□□□□ 0.43
LINC01561Q8N1V8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01561Q8N1V8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01561Q8N1V8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01561Q8N1V8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC17.73■□□□□ 0.43
LINC01561Q8N1V8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01561Q8N1V8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01561Q8N1V8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01561Q8N1V8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC17.72■□□□□ 0.43
LINC01561Q8N1V8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01561Q8N1V8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC17.71■□□□□ 0.43
LINC01561Q8N1V8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01561Q8N1V8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01561Q8N1V8 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC17.71■□□□□ 0.43
LINC01561Q8N1V8 AP002365.1-201ENST00000603448 772 ntBASIC17.71■□□□□ 0.43
LINC01561Q8N1V8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LINC01561Q8N1V8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LINC01561Q8N1V8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01561Q8N1V8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01561Q8N1V8 WASH5P-204ENST00000632292 975 ntBASIC17.7■□□□□ 0.42
LINC01561Q8N1V8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01561Q8N1V8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC17.69■□□□□ 0.42
LINC01561Q8N1V8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01561Q8N1V8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01561Q8N1V8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01561Q8N1V8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01561Q8N1V8 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
LINC01561Q8N1V8 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01561Q8N1V8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01561Q8N1V8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01561Q8N1V8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01561Q8N1V8 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01561Q8N1V8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01561Q8N1V8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01561Q8N1V8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01561Q8N1V8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC17.66■□□□□ 0.42
LINC01561Q8N1V8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC17.65■□□□□ 0.42
LINC01561Q8N1V8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC17.65■□□□□ 0.42
LINC01561Q8N1V8 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LINC01561Q8N1V8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LINC01561Q8N1V8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01561Q8N1V8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01561Q8N1V8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LINC01561Q8N1V8 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01561Q8N1V8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LINC01561Q8N1V8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01561Q8N1V8 AL139393.2-201ENST00000608721 2025 ntBASIC17.62■□□□□ 0.41
LINC01561Q8N1V8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01561Q8N1V8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LINC01561Q8N1V8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01561Q8N1V8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01561Q8N1V8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01561Q8N1V8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC17.61■□□□□ 0.41
LINC01561Q8N1V8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LINC01561Q8N1V8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01561Q8N1V8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LINC01561Q8N1V8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01561Q8N1V8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01561Q8N1V8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01561Q8N1V8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01561Q8N1V8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms