Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 LINC01971-201ENST00000617888 1048 ntBASIC38.21■■■■□ 3.71
XRN1Q8IZH2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC38.2■■■■□ 3.71
XRN1Q8IZH2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC38.18■■■■□ 3.7
XRN1Q8IZH2 DUX4L11-201ENST00000611504 1267 ntBASIC38.18■■■■□ 3.7
XRN1Q8IZH2 DUX4L12-201ENST00000614593 1267 ntBASIC38.18■■■■□ 3.7
XRN1Q8IZH2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC38.18■■■■□ 3.7
XRN1Q8IZH2 DUX4L14-201ENST00000621227 1267 ntBASIC38.18■■■■□ 3.7
XRN1Q8IZH2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
XRN1Q8IZH2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC38.17■■■■□ 3.7
XRN1Q8IZH2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC38.17■■■■□ 3.7
XRN1Q8IZH2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC38.17■■■■□ 3.7
XRN1Q8IZH2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC38.17■■■■□ 3.7
XRN1Q8IZH2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
XRN1Q8IZH2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC38.16■■■■□ 3.7
XRN1Q8IZH2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC38.16■■■■□ 3.7
XRN1Q8IZH2 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
XRN1Q8IZH2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC38.14■■■■□ 3.7
XRN1Q8IZH2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC38.14■■■■□ 3.7
XRN1Q8IZH2 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC38.13■■■■□ 3.69
XRN1Q8IZH2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC38.13■■■■□ 3.69
XRN1Q8IZH2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC38.12■■■■□ 3.69
XRN1Q8IZH2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC38.12■■■■□ 3.69
XRN1Q8IZH2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
XRN1Q8IZH2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
XRN1Q8IZH2 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
XRN1Q8IZH2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC38.11■■■■□ 3.69
XRN1Q8IZH2 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC38.1■■■■□ 3.69
XRN1Q8IZH2 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
XRN1Q8IZH2 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC38.09■■■■□ 3.69
XRN1Q8IZH2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
XRN1Q8IZH2 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC38.08■■■■□ 3.69
XRN1Q8IZH2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC38.08■■■■□ 3.69
XRN1Q8IZH2 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC38.07■■■■□ 3.69
XRN1Q8IZH2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC38.07■■■■□ 3.69
XRN1Q8IZH2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC38.07■■■■□ 3.68
XRN1Q8IZH2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
XRN1Q8IZH2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
XRN1Q8IZH2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
XRN1Q8IZH2 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC38.05■■■■□ 3.68
XRN1Q8IZH2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC38.04■■■■□ 3.68
XRN1Q8IZH2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC38.04■■■■□ 3.68
XRN1Q8IZH2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC38.04■■■■□ 3.68
XRN1Q8IZH2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
XRN1Q8IZH2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC38.03■■■■□ 3.68
XRN1Q8IZH2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC38.01■■■■□ 3.68
XRN1Q8IZH2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC38.01■■■■□ 3.68
XRN1Q8IZH2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC38.01■■■■□ 3.67
XRN1Q8IZH2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC38■■■■□ 3.67
XRN1Q8IZH2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
XRN1Q8IZH2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC37.99■■■■□ 3.67
XRN1Q8IZH2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
XRN1Q8IZH2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC37.98■■■■□ 3.67
XRN1Q8IZH2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC37.98■■■■□ 3.67
XRN1Q8IZH2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC37.98■■■■□ 3.67
XRN1Q8IZH2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC37.97■■■■□ 3.67
XRN1Q8IZH2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC37.93■■■■□ 3.66
XRN1Q8IZH2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC37.93■■■■□ 3.66
XRN1Q8IZH2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC37.93■■■■□ 3.66
XRN1Q8IZH2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC37.92■■■■□ 3.66
XRN1Q8IZH2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.66
XRN1Q8IZH2 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC37.91■■■■□ 3.66
XRN1Q8IZH2 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.66
XRN1Q8IZH2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC37.9■■■■□ 3.66
XRN1Q8IZH2 ABHD17AP3-201ENST00000503096 1137 ntBASIC37.88■■■■□ 3.65
XRN1Q8IZH2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC37.87■■■■□ 3.65
XRN1Q8IZH2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
XRN1Q8IZH2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC37.87■■■■□ 3.65
XRN1Q8IZH2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC37.86■■■■□ 3.65
XRN1Q8IZH2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC37.83■■■■□ 3.65
XRN1Q8IZH2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC37.82■■■■□ 3.64
XRN1Q8IZH2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
XRN1Q8IZH2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC37.81■■■■□ 3.64
XRN1Q8IZH2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC37.81■■■■□ 3.64
XRN1Q8IZH2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
XRN1Q8IZH2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC37.81■■■■□ 3.64
XRN1Q8IZH2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC37.81■■■■□ 3.64
XRN1Q8IZH2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC37.81■■■■□ 3.64
XRN1Q8IZH2 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC37.8■■■■□ 3.64
XRN1Q8IZH2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC37.79■■■■□ 3.64
XRN1Q8IZH2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC37.78■■■■□ 3.64
XRN1Q8IZH2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC37.77■■■■□ 3.64
XRN1Q8IZH2 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
XRN1Q8IZH2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC37.75■■■■□ 3.63
XRN1Q8IZH2 DUX4L13-201ENST00000554103 1267 ntBASIC37.75■■■■□ 3.63
XRN1Q8IZH2 DUX4L15-201ENST00000611059 1267 ntBASIC37.75■■■■□ 3.63
XRN1Q8IZH2 DUX4L23-201ENST00000615195 1269 ntBASIC37.75■■■■□ 3.63
XRN1Q8IZH2 DUX4L24-201ENST00000617576 1269 ntBASIC37.75■■■■□ 3.63
XRN1Q8IZH2 DUX4L22-201ENST00000618238 1269 ntBASIC37.75■■■■□ 3.63
XRN1Q8IZH2 DUX4L20-201ENST00000619712 1269 ntBASIC37.75■■■■□ 3.63
XRN1Q8IZH2 DUX4L21-201ENST00000622058 1269 ntBASIC37.75■■■■□ 3.63
XRN1Q8IZH2 DUX4L10-201ENST00000622460 1267 ntBASIC37.75■■■■□ 3.63
XRN1Q8IZH2 DUX4L25-201ENST00000624915 1269 ntBASIC37.75■■■■□ 3.63
XRN1Q8IZH2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
XRN1Q8IZH2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC37.75■■■■□ 3.63
XRN1Q8IZH2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC37.75■■■■□ 3.63
XRN1Q8IZH2 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC37.74■■■■□ 3.63
XRN1Q8IZH2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC37.74■■■■□ 3.63
XRN1Q8IZH2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC37.74■■■■□ 3.63
XRN1Q8IZH2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
XRN1Q8IZH2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC37.73■■■■□ 3.63
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms