Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC29.19■■■□□ 2.26
NPAS4Q8IUM7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
NPAS4Q8IUM7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC29.19■■■□□ 2.26
NPAS4Q8IUM7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
NPAS4Q8IUM7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.18■■■□□ 2.26
NPAS4Q8IUM7 MIR6090-201ENST00000622481 60 ntBASIC29.18■■■□□ 2.26
NPAS4Q8IUM7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.18■■■□□ 2.26
NPAS4Q8IUM7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
NPAS4Q8IUM7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
NPAS4Q8IUM7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
NPAS4Q8IUM7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
NPAS4Q8IUM7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.15■■■□□ 2.26
NPAS4Q8IUM7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.15■■■□□ 2.26
NPAS4Q8IUM7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
NPAS4Q8IUM7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
NPAS4Q8IUM7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.14■■■□□ 2.26
NPAS4Q8IUM7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
NPAS4Q8IUM7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.25
NPAS4Q8IUM7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.13■■■□□ 2.25
NPAS4Q8IUM7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.13■■■□□ 2.25
NPAS4Q8IUM7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
NPAS4Q8IUM7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.11■■■□□ 2.25
NPAS4Q8IUM7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
NPAS4Q8IUM7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.11■■■□□ 2.25
NPAS4Q8IUM7 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.11■■■□□ 2.25
NPAS4Q8IUM7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC29.1■■■□□ 2.25
NPAS4Q8IUM7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
NPAS4Q8IUM7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
NPAS4Q8IUM7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.09■■■□□ 2.25
NPAS4Q8IUM7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
NPAS4Q8IUM7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
NPAS4Q8IUM7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
NPAS4Q8IUM7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
NPAS4Q8IUM7 MIR639-201ENST00000384974 98 ntBASIC29.06■■■□□ 2.24
NPAS4Q8IUM7 MIR4449-201ENST00000578365 66 ntBASIC29.06■■■□□ 2.24
NPAS4Q8IUM7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.05■■■□□ 2.24
NPAS4Q8IUM7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC29.04■■■□□ 2.24
NPAS4Q8IUM7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.03■■■□□ 2.24
NPAS4Q8IUM7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.03■■■□□ 2.24
NPAS4Q8IUM7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
NPAS4Q8IUM7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.02■■■□□ 2.24
NPAS4Q8IUM7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
NPAS4Q8IUM7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
NPAS4Q8IUM7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC29.01■■■□□ 2.24
NPAS4Q8IUM7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
NPAS4Q8IUM7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.01■■■□□ 2.23
NPAS4Q8IUM7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
NPAS4Q8IUM7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
NPAS4Q8IUM7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
NPAS4Q8IUM7 MIR3648-2-201ENST00000581792 180 ntBASIC28.99■■■□□ 2.23
NPAS4Q8IUM7 MIR3648-1-201ENST00000615959 180 ntBASIC28.99■■■□□ 2.23
NPAS4Q8IUM7 LINC01971-201ENST00000617888 1048 ntBASIC28.99■■■□□ 2.23
NPAS4Q8IUM7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
NPAS4Q8IUM7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.97■■■□□ 2.23
NPAS4Q8IUM7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
NPAS4Q8IUM7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.97■■■□□ 2.23
NPAS4Q8IUM7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.97■■■□□ 2.23
NPAS4Q8IUM7 AC016575.1-201ENST00000607026 382 ntBASIC28.96■■■□□ 2.23
NPAS4Q8IUM7 DUX4L11-201ENST00000611504 1267 ntBASIC28.95■■■□□ 2.22
NPAS4Q8IUM7 DUX4L12-201ENST00000614593 1267 ntBASIC28.95■■■□□ 2.22
NPAS4Q8IUM7 DUX4L14-201ENST00000621227 1267 ntBASIC28.95■■■□□ 2.22
NPAS4Q8IUM7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
NPAS4Q8IUM7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.94■■■□□ 2.22
NPAS4Q8IUM7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
NPAS4Q8IUM7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
NPAS4Q8IUM7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.93■■■□□ 2.22
NPAS4Q8IUM7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC28.92■■■□□ 2.22
NPAS4Q8IUM7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.92■■■□□ 2.22
NPAS4Q8IUM7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.92■■■□□ 2.22
NPAS4Q8IUM7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
NPAS4Q8IUM7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.9■■■□□ 2.22
NPAS4Q8IUM7 CR559946.2-201ENST00000623684 991 ntBASIC28.89■■■□□ 2.22
NPAS4Q8IUM7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
NPAS4Q8IUM7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.87■■■□□ 2.21
NPAS4Q8IUM7 AC120057.4-201ENST00000624722 1615 ntBASIC28.87■■■□□ 2.21
NPAS4Q8IUM7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.87■■■□□ 2.21
NPAS4Q8IUM7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.86■■■□□ 2.21
NPAS4Q8IUM7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.86■■■□□ 2.21
NPAS4Q8IUM7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.86■■■□□ 2.21
NPAS4Q8IUM7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
NPAS4Q8IUM7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
NPAS4Q8IUM7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
NPAS4Q8IUM7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.85■■■□□ 2.21
NPAS4Q8IUM7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
NPAS4Q8IUM7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.84■■■□□ 2.21
NPAS4Q8IUM7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.84■■■□□ 2.21
NPAS4Q8IUM7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
NPAS4Q8IUM7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
NPAS4Q8IUM7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
NPAS4Q8IUM7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
NPAS4Q8IUM7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
NPAS4Q8IUM7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
NPAS4Q8IUM7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC28.79■■■□□ 2.2
NPAS4Q8IUM7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
NPAS4Q8IUM7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
NPAS4Q8IUM7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
NPAS4Q8IUM7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
NPAS4Q8IUM7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
NPAS4Q8IUM7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
NPAS4Q8IUM7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms