Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CSMD3Q7Z407 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CSMD3Q7Z407 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.08■□□□□ 0.64
CSMD3Q7Z407 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.07■□□□□ 0.64
CSMD3Q7Z407 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CSMD3Q7Z407 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CSMD3Q7Z407 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSMD3Q7Z407 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CSMD3Q7Z407 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.06■□□□□ 0.64
CSMD3Q7Z407 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.05■□□□□ 0.64
CSMD3Q7Z407 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CSMD3Q7Z407 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSMD3Q7Z407 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSMD3Q7Z407 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CSMD3Q7Z407 MIR6090-201ENST00000622481 60 ntBASIC19.04■□□□□ 0.64
CSMD3Q7Z407 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSMD3Q7Z407 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CSMD3Q7Z407 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CSMD3Q7Z407 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.02■□□□□ 0.64
CSMD3Q7Z407 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CSMD3Q7Z407 LINC01971-201ENST00000617888 1048 ntBASIC19.01■□□□□ 0.63
CSMD3Q7Z407 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSMD3Q7Z407 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CSMD3Q7Z407 RARRES2P2-201ENST00000394842 485 ntBASIC19■□□□□ 0.63
CSMD3Q7Z407 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CSMD3Q7Z407 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19■□□□□ 0.63
CSMD3Q7Z407 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSMD3Q7Z407 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSMD3Q7Z407 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSMD3Q7Z407 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSMD3Q7Z407 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSMD3Q7Z407 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.99■□□□□ 0.63
CSMD3Q7Z407 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.98■□□□□ 0.63
CSMD3Q7Z407 DUX4L11-201ENST00000611504 1267 ntBASIC18.98■□□□□ 0.63
CSMD3Q7Z407 DUX4L12-201ENST00000614593 1267 ntBASIC18.98■□□□□ 0.63
CSMD3Q7Z407 DUX4L14-201ENST00000621227 1267 ntBASIC18.98■□□□□ 0.63
CSMD3Q7Z407 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.96■□□□□ 0.63
CSMD3Q7Z407 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSMD3Q7Z407 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.95■□□□□ 0.62
CSMD3Q7Z407 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSMD3Q7Z407 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CSMD3Q7Z407 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSMD3Q7Z407 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.92■□□□□ 0.62
CSMD3Q7Z407 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.92■□□□□ 0.62
CSMD3Q7Z407 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSMD3Q7Z407 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSMD3Q7Z407 DUX4L13-201ENST00000554103 1267 ntBASIC18.91■□□□□ 0.62
CSMD3Q7Z407 DUX4L15-201ENST00000611059 1267 ntBASIC18.91■□□□□ 0.62
CSMD3Q7Z407 DUX4L23-201ENST00000615195 1269 ntBASIC18.91■□□□□ 0.62
CSMD3Q7Z407 DUX4L24-201ENST00000617576 1269 ntBASIC18.91■□□□□ 0.62
CSMD3Q7Z407 DUX4L22-201ENST00000618238 1269 ntBASIC18.91■□□□□ 0.62
CSMD3Q7Z407 DUX4L20-201ENST00000619712 1269 ntBASIC18.91■□□□□ 0.62
CSMD3Q7Z407 DUX4L21-201ENST00000622058 1269 ntBASIC18.91■□□□□ 0.62
CSMD3Q7Z407 DUX4L10-201ENST00000622460 1267 ntBASIC18.91■□□□□ 0.62
CSMD3Q7Z407 DUX4L25-201ENST00000624915 1269 ntBASIC18.91■□□□□ 0.62
CSMD3Q7Z407 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CSMD3Q7Z407 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CSMD3Q7Z407 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CSMD3Q7Z407 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CSMD3Q7Z407 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSMD3Q7Z407 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.9■□□□□ 0.62
CSMD3Q7Z407 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CSMD3Q7Z407 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSMD3Q7Z407 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.62
CSMD3Q7Z407 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CSMD3Q7Z407 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
CSMD3Q7Z407 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.89■□□□□ 0.61
CSMD3Q7Z407 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CSMD3Q7Z407 AC108673.1-201ENST00000510422 1159 ntBASIC18.88■□□□□ 0.61
CSMD3Q7Z407 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.88■□□□□ 0.61
CSMD3Q7Z407 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.86■□□□□ 0.61
CSMD3Q7Z407 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSMD3Q7Z407 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CSMD3Q7Z407 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSMD3Q7Z407 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.86■□□□□ 0.61
CSMD3Q7Z407 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CSMD3Q7Z407 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CSMD3Q7Z407 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CSMD3Q7Z407 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSMD3Q7Z407 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CSMD3Q7Z407 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CSMD3Q7Z407 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.83■□□□□ 0.61
CSMD3Q7Z407 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.83■□□□□ 0.6
CSMD3Q7Z407 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.83■□□□□ 0.6
CSMD3Q7Z407 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC18.83■□□□□ 0.6
CSMD3Q7Z407 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CSMD3Q7Z407 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC18.82■□□□□ 0.6
CSMD3Q7Z407 ABHD17AP5-201ENST00000580133 923 ntBASIC18.82■□□□□ 0.6
CSMD3Q7Z407 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSMD3Q7Z407 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC18.81■□□□□ 0.6
CSMD3Q7Z407 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSMD3Q7Z407 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSMD3Q7Z407 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CSMD3Q7Z407 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSMD3Q7Z407 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CSMD3Q7Z407 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSMD3Q7Z407 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSMD3Q7Z407 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSMD3Q7Z407 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.79■□□□□ 0.6
CSMD3Q7Z407 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms