Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 AL135925.1-201ENST00000605920 1701 ntBASIC29.45■■■□□ 2.3
CDKAL1Q5VV42 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CDKAL1Q5VV42 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CDKAL1Q5VV42 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
CDKAL1Q5VV42 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
CDKAL1Q5VV42 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CDKAL1Q5VV42 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CDKAL1Q5VV42 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.4■■■□□ 2.3
CDKAL1Q5VV42 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.4■■■□□ 2.3
CDKAL1Q5VV42 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
CDKAL1Q5VV42 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.39■■■□□ 2.3
CDKAL1Q5VV42 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC29.39■■■□□ 2.3
CDKAL1Q5VV42 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
CDKAL1Q5VV42 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
CDKAL1Q5VV42 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
CDKAL1Q5VV42 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.38■■■□□ 2.29
CDKAL1Q5VV42 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
CDKAL1Q5VV42 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CDKAL1Q5VV42 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC29.33■■■□□ 2.29
CDKAL1Q5VV42 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CDKAL1Q5VV42 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC29.33■■■□□ 2.29
CDKAL1Q5VV42 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CDKAL1Q5VV42 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CDKAL1Q5VV42 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC29.32■■■□□ 2.28
CDKAL1Q5VV42 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CDKAL1Q5VV42 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
CDKAL1Q5VV42 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CDKAL1Q5VV42 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CDKAL1Q5VV42 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC29.28■■■□□ 2.28
CDKAL1Q5VV42 WASH5P-204ENST00000632292 975 ntBASIC29.27■■■□□ 2.28
CDKAL1Q5VV42 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CDKAL1Q5VV42 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29.27■■■□□ 2.28
CDKAL1Q5VV42 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC29.25■■■□□ 2.27
CDKAL1Q5VV42 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC29.25■■■□□ 2.27
CDKAL1Q5VV42 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC29.24■■■□□ 2.27
CDKAL1Q5VV42 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CDKAL1Q5VV42 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.23■■■□□ 2.27
CDKAL1Q5VV42 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CDKAL1Q5VV42 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.23■■■□□ 2.27
CDKAL1Q5VV42 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CDKAL1Q5VV42 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CDKAL1Q5VV42 AL133380.1-201ENST00000506013 324 ntBASIC29.21■■■□□ 2.27
CDKAL1Q5VV42 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CDKAL1Q5VV42 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CDKAL1Q5VV42 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.2■■■□□ 2.27
CDKAL1Q5VV42 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.26
CDKAL1Q5VV42 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.19■■■□□ 2.26
CDKAL1Q5VV42 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CDKAL1Q5VV42 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CDKAL1Q5VV42 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
CDKAL1Q5VV42 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CDKAL1Q5VV42 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CDKAL1Q5VV42 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CDKAL1Q5VV42 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
CDKAL1Q5VV42 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CDKAL1Q5VV42 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CDKAL1Q5VV42 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CDKAL1Q5VV42 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.14■■■□□ 2.26
CDKAL1Q5VV42 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC29.13■■■□□ 2.25
CDKAL1Q5VV42 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC29.13■■■□□ 2.25
CDKAL1Q5VV42 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.12■■■□□ 2.25
CDKAL1Q5VV42 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.12■■■□□ 2.25
CDKAL1Q5VV42 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CDKAL1Q5VV42 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CDKAL1Q5VV42 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC29.1■■■□□ 2.25
CDKAL1Q5VV42 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CDKAL1Q5VV42 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.08■■■□□ 2.25
CDKAL1Q5VV42 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CDKAL1Q5VV42 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC29.07■■■□□ 2.24
CDKAL1Q5VV42 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
CDKAL1Q5VV42 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CDKAL1Q5VV42 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CDKAL1Q5VV42 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC29.06■■■□□ 2.24
CDKAL1Q5VV42 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CDKAL1Q5VV42 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CDKAL1Q5VV42 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC29.06■■■□□ 2.24
CDKAL1Q5VV42 AL139393.2-201ENST00000608721 2025 ntBASIC29.04■■■□□ 2.24
CDKAL1Q5VV42 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
CDKAL1Q5VV42 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.03■■■□□ 2.24
CDKAL1Q5VV42 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CDKAL1Q5VV42 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CDKAL1Q5VV42 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
CDKAL1Q5VV42 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
CDKAL1Q5VV42 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC29.02■■■□□ 2.24
CDKAL1Q5VV42 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.02■■■□□ 2.24
CDKAL1Q5VV42 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
CDKAL1Q5VV42 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
CDKAL1Q5VV42 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
CDKAL1Q5VV42 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
CDKAL1Q5VV42 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
CDKAL1Q5VV42 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
CDKAL1Q5VV42 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
CDKAL1Q5VV42 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
CDKAL1Q5VV42 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.97■■■□□ 2.23
CDKAL1Q5VV42 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
CDKAL1Q5VV42 AC142086.6-201ENST00000621154 1765 ntBASIC28.96■■■□□ 2.23
CDKAL1Q5VV42 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC28.95■■■□□ 2.23
CDKAL1Q5VV42 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.95■■■□□ 2.22
CDKAL1Q5VV42 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC28.94■■■□□ 2.22
CDKAL1Q5VV42 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC28.94■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms