Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.92□□□□□ -0.022e-9■■■■■ 51.1
DDX59Q5T1V6 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.142e-9■■■■■ 51.1
DDX59Q5T1V6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.34e-7■■■■■ 50.7
DDX59Q5T1V6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.24e-7■■■■■ 50.7
DDX59Q5T1V6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.98■□□□□ 0.154e-7■■■■■ 50.7
DDX59Q5T1V6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.21■□□□□ 0.512e-10■■■■■ 50.7
DDX59Q5T1V6 SARDH-206ENST00000427237 1957 ntTSL 217.2■□□□□ 0.342e-10■■■■■ 50.7
DDX59Q5T1V6 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.362e-10■■■■■ 50.7
DDX59Q5T1V6 SARDH-207ENST00000439388 3216 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.482e-10■■■■■ 50.7
DDX59Q5T1V6 PROSER3-212ENST00000544876 419 ntTSL 310.27□□□□□ -0.772e-10■■■■■ 50.7
DDX59Q5T1V6 PRKAR1B-206ENST00000417852 651 ntTSL 217.45■□□□□ 0.388e-11■■■■■ 50.7
DDX59Q5T1V6 PRKAR1B-208ENST00000456696 518 ntTSL 515.18■□□□□ 0.028e-11■■■■■ 50.7
DDX59Q5T1V6 PRKAR1B-210ENST00000488474 617 ntTSL 312.81□□□□□ -0.368e-11■■■■■ 50.7
DDX59Q5T1V6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.625e-10■■■■■ 50.7
DDX59Q5T1V6 DHRS3-201ENST00000430996 826 ntTSL 317.11■□□□□ 0.331e-7■■■■■ 49.9
DDX59Q5T1V6 RNF38-208ENST00000488058 582 ntTSL 321.38■■□□□ 1.011e-8■■■■■ 48.9
DDX59Q5T1V6 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.541e-8■■■■■ 48.9
DDX59Q5T1V6 EXOC3L4-206ENST00000560304 657 ntTSL 319.65■□□□□ 0.742e-12■■■■■ 48.8
DDX59Q5T1V6 EXOC3L4-204ENST00000559693 813 ntTSL 316.26■□□□□ 0.192e-12■■■■■ 48.8
DDX59Q5T1V6 EIF4G2-203ENST00000524932 1286 ntTSL 518.69■□□□□ 0.581e-21■■■■■ 48.4
DDX59Q5T1V6 EIF4G2-228ENST00000534246 523 ntTSL 214.47□□□□□ -0.091e-21■■■■■ 48.4
DDX59Q5T1V6 EIF4G2-210ENST00000527419 571 ntTSL 513.3□□□□□ -0.281e-21■■■■■ 48.4
DDX59Q5T1V6 EIF4G2-216ENST00000530702 563 ntTSL 211.56□□□□□ -0.561e-21■■■■■ 48.4
DDX59Q5T1V6 EIF4G2-214ENST00000530211 591 ntTSL 210.56□□□□□ -0.721e-21■■■■■ 48.4
DDX59Q5T1V6 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.941e-21■■■■■ 48.4
DDX59Q5T1V6 EIF4G2-219ENST00000531507 591 ntTSL 59.12□□□□□ -0.951e-21■■■■■ 48.4
DDX59Q5T1V6 EIF4G2-226ENST00000532570 573 ntTSL 58.68□□□□□ -1.021e-21■■■■■ 48.4
DDX59Q5T1V6 EIF4G2-206ENST00000525972 584 ntTSL 25.73□□□□□ -1.491e-21■■■■■ 48.4
DDX59Q5T1V6 EIF4G2-212ENST00000528562 601 ntTSL 45.17□□□□□ -1.581e-21■■■■■ 48.4
DDX59Q5T1V6 COMTD1-203ENST00000469299 871 ntTSL 319.41■□□□□ 0.76e-10■■■■■ 48.2
DDX59Q5T1V6 COMTD1-204ENST00000470947 796 ntTSL 219.41■□□□□ 0.76e-10■■■■■ 48.2
DDX59Q5T1V6 COMTD1-202ENST00000460899 1094 ntTSL 219.41■□□□□ 0.76e-10■■■■■ 48.2
DDX59Q5T1V6 COMTD1-205ENST00000490521 562 ntTSL 219.25■□□□□ 0.676e-10■■■■■ 48.2
DDX59Q5T1V6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.466e-10■■■■■ 48.2
DDX59Q5T1V6 RGS12-211ENST00000506998 1625 ntTSL 1 (best)17.89■□□□□ 0.456e-10■■■■■ 48.2
DDX59Q5T1V6 COMTD1-207ENST00000494596 539 ntTSL 217.56■□□□□ 0.46e-10■■■■■ 48.2
DDX59Q5T1V6 NPHP4-209ENST00000489180 5548 ntTSL 217.48■□□□□ 0.396e-10■■■■■ 48.2
DDX59Q5T1V6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.276e-10■■■■■ 48.2
DDX59Q5T1V6 RGS12-206ENST00000503041 380 ntTSL 315.96■□□□□ 0.156e-10■■■■■ 48.2
DDX59Q5T1V6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.27■□□□□ 0.036e-10■■■■■ 48.2
DDX59Q5T1V6 RGS12-214ENST00000508158 2121 ntTSL 215.22■□□□□ 0.036e-10■■■■■ 48.2
DDX59Q5T1V6 RGS12-209ENST00000505570 241 ntTSL 514.75□□□□□ -0.056e-10■■■■■ 48.2
DDX59Q5T1V6 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.096e-10■■■■■ 48.2
DDX59Q5T1V6 NPHP4-208ENST00000478423 4467 ntTSL 213.74□□□□□ -0.216e-10■■■■■ 48.2
DDX59Q5T1V6 NPHP4-203ENST00000378169 4213 ntTSL 1 (best)12.77□□□□□ -0.376e-10■■■■■ 48.2
DDX59Q5T1V6 RGS12-221ENST00000512990 328 ntTSL 512.65□□□□□ -0.386e-10■■■■■ 48.2
DDX59Q5T1V6 GALNT2-205ENST00000494106 692 ntTSL 512.36□□□□□ -0.436e-10■■■■■ 48.2
DDX59Q5T1V6 PLXNB2-210ENST00000479818 1916 ntTSL 1 (best)16.52■□□□□ 0.237e-12■■■■■ 48.1
DDX59Q5T1V6 PLXNB2-208ENST00000463165 3038 ntTSL 212.89□□□□□ -0.357e-12■■■■■ 48.1
DDX59Q5T1V6 PLXNB2-209ENST00000479701 3504 ntTSL 212.78□□□□□ -0.367e-12■■■■■ 48.1
DDX59Q5T1V6 PLXNB2-213ENST00000610984 3443 ntTSL 5 BASIC10.91□□□□□ -0.667e-12■■■■■ 48.1
DDX59Q5T1V6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.591e-7■■■■■ 48
DDX59Q5T1V6 SSH1-208ENST00000548522 602 ntTSL 314.59□□□□□ -0.071e-7■■■■■ 48
DDX59Q5T1V6 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.411e-7■■■■■ 48
DDX59Q5T1V6 ANKRD11-204ENST00000378332 1982 ntTSL 220.04■□□□□ 0.81e-6■■■■■ 47.9
DDX59Q5T1V6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.761e-6■■■■■ 47.9
DDX59Q5T1V6 ANKRD11-207ENST00000562816 573 ntTSL 49.97□□□□□ -0.811e-6■■■■■ 47.9
DDX59Q5T1V6 RECQL4-205ENST00000532846 1055 ntTSL 515.97■□□□□ 0.153e-10■■■■■ 47.8
DDX59Q5T1V6 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.152e-6■■■■■ 47.8
DDX59Q5T1V6 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.382e-6■■■■■ 47.8
DDX59Q5T1V6 GRAMD4-205ENST00000447351 375 ntTSL 312.34□□□□□ -0.432e-6■■■■■ 47.8
DDX59Q5T1V6 GRAMD4-207ENST00000490378 193 ntTSL 32.62□□□□□ -1.992e-6■■■■■ 47.8
DDX59Q5T1V6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.46■□□□□ 0.397e-19■■■■■ 47.7
DDX59Q5T1V6 RBCK1-209ENST00000415942 2613 ntTSL 517.13■□□□□ 0.337e-19■■■■■ 47.7
DDX59Q5T1V6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.9■□□□□ 0.37e-19■■■■■ 47.7
DDX59Q5T1V6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.277e-19■■■■■ 47.7
DDX59Q5T1V6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.34■□□□□ 0.057e-19■■■■■ 47.7
DDX59Q5T1V6 RBCK1-204ENST00000382214 2752 ntTSL 1 (best)15.22■□□□□ 0.037e-19■■■■■ 47.7
DDX59Q5T1V6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.381e-7■■■■■ 47.6
DDX59Q5T1V6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.48■□□□□ 0.391e-7■■■■■ 47.6
DDX59Q5T1V6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.56■□□□□ 0.241e-7■■■■■ 47.6
DDX59Q5T1V6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.49■□□□□ 0.231e-7■■■■■ 47.6
DDX59Q5T1V6 PACS2-204ENST00000546915 576 ntTSL 414.05□□□□□ -0.161e-7■■■■■ 47.6
DDX59Q5T1V6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.443e-8■■■■■ 47.5
DDX59Q5T1V6 SLCO4A1-208ENST00000497209 3092 ntTSL 1 (best)15.03■□□□□ -03e-8■■■■■ 47.5
DDX59Q5T1V6 MNT-204ENST00000572892 556 ntTSL 418.47■□□□□ 0.551e-11■■■■■ 47.4
DDX59Q5T1V6 MNT-207ENST00000575374 936 ntTSL 313.43□□□□□ -0.261e-11■■■■■ 47.4
DDX59Q5T1V6 EXOC3L4-207ENST00000560925 2341 ntTSL 222.91■■□□□ 1.264e-10■■■■■ 47.3
DDX59Q5T1V6 AP003108.2-202ENST00000541135 580 ntAPPRIS P1 TSL 417.26■□□□□ 0.359e-10■■■■■ 47.3
DDX59Q5T1V6 DUS2-203ENST00000561965 1712 ntTSL 516.93■□□□□ 0.39e-10■■■■■ 47.3
DDX59Q5T1V6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.05■□□□□ -09e-10■■■■■ 47.3
DDX59Q5T1V6 AP003108.2-206ENST00000544801 875 ntTSL 514.68□□□□□ -0.069e-10■■■■■ 47.3
DDX59Q5T1V6 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.19e-10■■■■■ 47.3
DDX59Q5T1V6 AP003108.2-207ENST00000544880 591 ntTSL 413.96□□□□□ -0.179e-10■■■■■ 47.3
DDX59Q5T1V6 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.229e-10■■■■■ 47.3
DDX59Q5T1V6 AP003108.2-201ENST00000544025 563 ntTSL 48.23□□□□□ -1.099e-10■■■■■ 47.3
DDX59Q5T1V6 DUS2-204ENST00000562246 736 ntTSL 28.08□□□□□ -1.129e-10■■■■■ 47.3
DDX59Q5T1V6 AP003108.2-208ENST00000543044 883 ntTSL 3 BASIC7.93□□□□□ -1.149e-10■■■■■ 47.3
DDX59Q5T1V6 AP003108.2-203ENST00000536670 449 ntTSL 57.87□□□□□ -1.159e-10■■■■■ 47.3
DDX59Q5T1V6 AP003108.2-205ENST00000538594 569 ntTSL 47.63□□□□□ -1.199e-10■■■■■ 47.3
DDX59Q5T1V6 EPS8L2-220ENST00000531393 2304 ntTSL 1 (best)18.99■□□□□ 0.631e-6■■■■■ 47.2
DDX59Q5T1V6 EPS8L2-212ENST00000528770 2233 ntTSL 217.43■□□□□ 0.381e-6■■■■■ 47.2
DDX59Q5T1V6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.647e-8■■■■■ 47.2
DDX59Q5T1V6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.341e-6■■■■■ 47.2
DDX59Q5T1V6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.54■□□□□ 0.886e-10■■■■■ 47.2
DDX59Q5T1V6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.846e-10■■■■■ 47.2
DDX59Q5T1V6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.34■□□□□ 0.376e-10■■■■■ 47.2
DDX59Q5T1V6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.16■□□□□ 0.346e-10■■■■■ 47.2
DDX59Q5T1V6 SEC16B-202ENST00000327037 1807 ntTSL 216.98■□□□□ 0.313e-10■■■■■ 47
DDX59Q5T1V6 SEC16B-208ENST00000528461 3277 ntTSL 1 (best)12.92□□□□□ -0.343e-10■■■■■ 47
Retrieved 100 of 7,289 protein–RNA pairs in 479 ms