Protein–RNA interactions for Protein: P78346

RPP30, Ribonuclease P protein subunit p30, humanhuman

Known RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP30P78346 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPP30P78346 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.41■■□□□ 1.02
RPP30P78346 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
RPP30P78346 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPP30P78346 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPP30P78346 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RPP30P78346 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.38■■□□□ 1.01
RPP30P78346 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
RPP30P78346 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RPP30P78346 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPP30P78346 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPP30P78346 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPP30P78346 ZNRF2P1-201ENST00000441407 443 ntBASIC21.36■■□□□ 1.01
RPP30P78346 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RPP30P78346 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RPP30P78346 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RPP30P78346 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
RPP30P78346 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
RPP30P78346 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPP30P78346 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RPP30P78346 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
RPP30P78346 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RPP30P78346 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
RPP30P78346 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1
RPP30P78346 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.31■■□□□ 1
RPP30P78346 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.29■■□□□ 1
RPP30P78346 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.29■■□□□ 1
RPP30P78346 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
RPP30P78346 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC21.29■■□□□ 1
RPP30P78346 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.29■■□□□ 1
RPP30P78346 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RPP30P78346 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.27■■□□□ 1
RPP30P78346 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
RPP30P78346 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RPP30P78346 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
RPP30P78346 AL135925.1-201ENST00000605920 1701 ntBASIC21.26■□□□□ 0.99
RPP30P78346 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPP30P78346 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.25■□□□□ 0.99
RPP30P78346 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RPP30P78346 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPP30P78346 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPP30P78346 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RPP30P78346 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPP30P78346 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPP30P78346 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPP30P78346 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPP30P78346 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPP30P78346 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPP30P78346 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RPP30P78346 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPP30P78346 DYNLL1-208ENST00000550178 581 ntBASIC21.22■□□□□ 0.99
RPP30P78346 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPP30P78346 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RPP30P78346 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPP30P78346 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPP30P78346 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.21■□□□□ 0.99
RPP30P78346 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPP30P78346 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPP30P78346 AC142086.6-201ENST00000621154 1765 ntBASIC21.2■□□□□ 0.98
RPP30P78346 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPP30P78346 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RPP30P78346 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPP30P78346 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.19■□□□□ 0.98
RPP30P78346 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPP30P78346 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPP30P78346 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPP30P78346 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPP30P78346 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPP30P78346 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPP30P78346 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RPP30P78346 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.18■□□□□ 0.98
RPP30P78346 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPP30P78346 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RPP30P78346 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RPP30P78346 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPP30P78346 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPP30P78346 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPP30P78346 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RPP30P78346 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RPP30P78346 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPP30P78346 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPP30P78346 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPP30P78346 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.15■□□□□ 0.98
RPP30P78346 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.14■□□□□ 0.98
RPP30P78346 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RPP30P78346 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPP30P78346 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPP30P78346 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.13■□□□□ 0.97
RPP30P78346 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RPP30P78346 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPP30P78346 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RPP30P78346 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.12■□□□□ 0.97
RPP30P78346 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
RPP30P78346 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPP30P78346 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC21.1■□□□□ 0.97
RPP30P78346 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.09■□□□□ 0.97
RPP30P78346 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPP30P78346 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPP30P78346 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.09■□□□□ 0.97
RPP30P78346 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms