Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC36.56■■■■□ 3.44
ZC3H6P61129 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
ZC3H6P61129 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC36.55■■■■□ 3.44
ZC3H6P61129 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC36.55■■■■□ 3.44
ZC3H6P61129 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC36.55■■■■□ 3.44
ZC3H6P61129 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC36.54■■■■□ 3.44
ZC3H6P61129 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC36.54■■■■□ 3.44
ZC3H6P61129 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC36.54■■■■□ 3.44
ZC3H6P61129 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC36.54■■■■□ 3.44
ZC3H6P61129 HSD17B1P1-201ENST00000590052 955 ntBASIC36.53■■■■□ 3.44
ZC3H6P61129 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC36.52■■■■□ 3.44
ZC3H6P61129 DUX4L11-201ENST00000611504 1267 ntBASIC36.52■■■■□ 3.44
ZC3H6P61129 DUX4L12-201ENST00000614593 1267 ntBASIC36.52■■■■□ 3.44
ZC3H6P61129 DUX4L14-201ENST00000621227 1267 ntBASIC36.52■■■■□ 3.44
ZC3H6P61129 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
ZC3H6P61129 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC36.51■■■■□ 3.44
ZC3H6P61129 CR559946.2-201ENST00000623684 991 ntBASIC36.51■■■■□ 3.44
ZC3H6P61129 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC36.5■■■■□ 3.43
ZC3H6P61129 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC36.5■■■■□ 3.43
ZC3H6P61129 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC36.5■■■■□ 3.43
ZC3H6P61129 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC36.49■■■■□ 3.43
ZC3H6P61129 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
ZC3H6P61129 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC36.45■■■■□ 3.43
ZC3H6P61129 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC36.45■■■■□ 3.43
ZC3H6P61129 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC36.45■■■■□ 3.43
ZC3H6P61129 LINC01971-201ENST00000617888 1048 ntBASIC36.44■■■■□ 3.42
ZC3H6P61129 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
ZC3H6P61129 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC36.43■■■■□ 3.42
ZC3H6P61129 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
ZC3H6P61129 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC36.42■■■■□ 3.42
ZC3H6P61129 BRD4-212ENST00000630599 726 ntTSL 2 BASIC36.42■■■■□ 3.42
ZC3H6P61129 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC36.41■■■■□ 3.42
ZC3H6P61129 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
ZC3H6P61129 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC36.39■■■■□ 3.42
ZC3H6P61129 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC36.39■■■■□ 3.42
ZC3H6P61129 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC36.39■■■■□ 3.42
ZC3H6P61129 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC36.39■■■■□ 3.42
ZC3H6P61129 AGPS-202ENST00000409888 815 ntTSL 4 BASIC36.38■■■■□ 3.41
ZC3H6P61129 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
ZC3H6P61129 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC36.37■■■■□ 3.41
ZC3H6P61129 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC36.36■■■■□ 3.41
ZC3H6P61129 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC36.36■■■■□ 3.41
ZC3H6P61129 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC36.36■■■■□ 3.41
ZC3H6P61129 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC36.36■■■■□ 3.41
ZC3H6P61129 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
ZC3H6P61129 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC36.33■■■■□ 3.41
ZC3H6P61129 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
ZC3H6P61129 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
ZC3H6P61129 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
ZC3H6P61129 ABHD17AP3-201ENST00000503096 1137 ntBASIC36.31■■■■□ 3.4
ZC3H6P61129 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC36.3■■■■□ 3.4
ZC3H6P61129 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC36.29■■■■□ 3.4
ZC3H6P61129 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC36.29■■■■□ 3.4
ZC3H6P61129 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
ZC3H6P61129 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC36.28■■■■□ 3.4
ZC3H6P61129 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC36.26■■■■□ 3.39
ZC3H6P61129 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC36.25■■■■□ 3.39
ZC3H6P61129 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC36.25■■■■□ 3.39
ZC3H6P61129 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC36.25■■■■□ 3.39
ZC3H6P61129 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC36.25■■■■□ 3.39
ZC3H6P61129 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC36.24■■■■□ 3.39
ZC3H6P61129 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC36.24■■■■□ 3.39
ZC3H6P61129 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
ZC3H6P61129 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC36.23■■■■□ 3.39
ZC3H6P61129 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC36.22■■■■□ 3.39
ZC3H6P61129 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC36.2■■■■□ 3.39
ZC3H6P61129 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
ZC3H6P61129 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC36.18■■■■□ 3.38
ZC3H6P61129 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC36.18■■■■□ 3.38
ZC3H6P61129 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC36.17■■■■□ 3.38
ZC3H6P61129 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
ZC3H6P61129 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC36.17■■■■□ 3.38
ZC3H6P61129 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC36.17■■■■□ 3.38
ZC3H6P61129 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
ZC3H6P61129 METRNL-202ENST00000570778 967 ntTSL 5 BASIC36.16■■■■□ 3.38
ZC3H6P61129 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC36.16■■■■□ 3.38
ZC3H6P61129 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC36.14■■■■□ 3.38
ZC3H6P61129 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC36.13■■■■□ 3.37
ZC3H6P61129 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC36.13■■■■□ 3.37
ZC3H6P61129 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC36.13■■■■□ 3.37
ZC3H6P61129 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC36.13■■■■□ 3.37
ZC3H6P61129 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC36.12■■■■□ 3.37
ZC3H6P61129 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
ZC3H6P61129 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC36.1■■■■□ 3.37
ZC3H6P61129 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC36.1■■■■□ 3.37
ZC3H6P61129 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC36.09■■■■□ 3.37
ZC3H6P61129 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
ZC3H6P61129 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC36.08■■■■□ 3.37
ZC3H6P61129 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC36.06■■■■□ 3.36
ZC3H6P61129 DUX4L13-201ENST00000554103 1267 ntBASIC36.06■■■■□ 3.36
ZC3H6P61129 DUX4L15-201ENST00000611059 1267 ntBASIC36.06■■■■□ 3.36
ZC3H6P61129 DUX4L23-201ENST00000615195 1269 ntBASIC36.06■■■■□ 3.36
ZC3H6P61129 DUX4L24-201ENST00000617576 1269 ntBASIC36.06■■■■□ 3.36
ZC3H6P61129 DUX4L22-201ENST00000618238 1269 ntBASIC36.06■■■■□ 3.36
ZC3H6P61129 DUX4L20-201ENST00000619712 1269 ntBASIC36.06■■■■□ 3.36
ZC3H6P61129 DUX4L21-201ENST00000622058 1269 ntBASIC36.06■■■■□ 3.36
ZC3H6P61129 DUX4L10-201ENST00000622460 1267 ntBASIC36.06■■■■□ 3.36
ZC3H6P61129 DUX4L25-201ENST00000624915 1269 ntBASIC36.06■■■■□ 3.36
ZC3H6P61129 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
ZC3H6P61129 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC36.05■■■■□ 3.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms