Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APOC4P55056 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APOC4P55056 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.6■□□□□ 0.73
APOC4P55056 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
APOC4P55056 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
APOC4P55056 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
APOC4P55056 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
APOC4P55056 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
APOC4P55056 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.58■□□□□ 0.72
APOC4P55056 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
APOC4P55056 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
APOC4P55056 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
APOC4P55056 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APOC4P55056 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
APOC4P55056 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APOC4P55056 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.56■□□□□ 0.72
APOC4P55056 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
APOC4P55056 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APOC4P55056 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
APOC4P55056 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
APOC4P55056 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOC4P55056 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOC4P55056 AC108673.1-201ENST00000510422 1159 ntBASIC19.54■□□□□ 0.72
APOC4P55056 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
APOC4P55056 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
APOC4P55056 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.53■□□□□ 0.72
APOC4P55056 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.52■□□□□ 0.72
APOC4P55056 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
APOC4P55056 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.51■□□□□ 0.71
APOC4P55056 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.51■□□□□ 0.71
APOC4P55056 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.51■□□□□ 0.71
APOC4P55056 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
APOC4P55056 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
APOC4P55056 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.5■□□□□ 0.71
APOC4P55056 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.49■□□□□ 0.71
APOC4P55056 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.49■□□□□ 0.71
APOC4P55056 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
APOC4P55056 ABHD17AP4-201ENST00000411545 909 ntBASIC19.48■□□□□ 0.71
APOC4P55056 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.48■□□□□ 0.71
APOC4P55056 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
APOC4P55056 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.47■□□□□ 0.71
APOC4P55056 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APOC4P55056 DUX4L29-201ENST00000425409 679 ntBASIC19.46■□□□□ 0.71
APOC4P55056 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOC4P55056 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
APOC4P55056 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
APOC4P55056 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.45■□□□□ 0.7
APOC4P55056 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOC4P55056 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.44■□□□□ 0.7
APOC4P55056 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOC4P55056 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.44■□□□□ 0.7
APOC4P55056 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOC4P55056 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOC4P55056 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOC4P55056 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOC4P55056 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOC4P55056 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
APOC4P55056 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.42■□□□□ 0.7
APOC4P55056 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOC4P55056 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.42■□□□□ 0.7
APOC4P55056 AL161658.1-201ENST00000623641 1967 ntBASIC19.42■□□□□ 0.7
APOC4P55056 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOC4P55056 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
APOC4P55056 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
APOC4P55056 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
APOC4P55056 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOC4P55056 MIR7108-201ENST00000614319 87 ntBASIC19.4■□□□□ 0.7
APOC4P55056 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
APOC4P55056 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
APOC4P55056 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.38■□□□□ 0.69
APOC4P55056 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.38■□□□□ 0.69
APOC4P55056 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
APOC4P55056 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
APOC4P55056 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.37■□□□□ 0.69
APOC4P55056 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
APOC4P55056 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.37■□□□□ 0.69
APOC4P55056 MIR6090-201ENST00000622481 60 ntBASIC19.37■□□□□ 0.69
APOC4P55056 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
APOC4P55056 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
APOC4P55056 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
APOC4P55056 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
APOC4P55056 ZNRF2P2-203ENST00000454624 420 ntBASIC19.36■□□□□ 0.69
APOC4P55056 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.36■□□□□ 0.69
APOC4P55056 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
APOC4P55056 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
APOC4P55056 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOC4P55056 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOC4P55056 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
APOC4P55056 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOC4P55056 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
APOC4P55056 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
APOC4P55056 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.34■□□□□ 0.69
APOC4P55056 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
APOC4P55056 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
APOC4P55056 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
APOC4P55056 AC021231.2-201ENST00000594613 730 ntBASIC19.33■□□□□ 0.68
APOC4P55056 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
APOC4P55056 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
APOC4P55056 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
APOC4P55056 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms