Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
CLCNKAP51800 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.2■■□□□ 1.78
CLCNKAP51800 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.2■■□□□ 1.78
CLCNKAP51800 AC044849.2-201ENST00000606596 710 ntBASIC26.2■■□□□ 1.78
CLCNKAP51800 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
CLCNKAP51800 AL161658.1-201ENST00000623641 1967 ntBASIC26.19■■□□□ 1.78
CLCNKAP51800 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
CLCNKAP51800 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.18■■□□□ 1.78
CLCNKAP51800 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CLCNKAP51800 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CLCNKAP51800 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.17■■□□□ 1.78
CLCNKAP51800 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CLCNKAP51800 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.17■■□□□ 1.78
CLCNKAP51800 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
CLCNKAP51800 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CLCNKAP51800 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.16■■□□□ 1.78
CLCNKAP51800 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
CLCNKAP51800 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CLCNKAP51800 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CLCNKAP51800 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CLCNKAP51800 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CLCNKAP51800 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CLCNKAP51800 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.13■■□□□ 1.77
CLCNKAP51800 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CLCNKAP51800 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
CLCNKAP51800 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CLCNKAP51800 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CLCNKAP51800 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
CLCNKAP51800 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.09■■□□□ 1.77
CLCNKAP51800 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.09■■□□□ 1.77
CLCNKAP51800 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CLCNKAP51800 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.08■■□□□ 1.77
CLCNKAP51800 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.08■■□□□ 1.77
CLCNKAP51800 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CLCNKAP51800 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CLCNKAP51800 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CLCNKAP51800 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.07■■□□□ 1.76
CLCNKAP51800 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
CLCNKAP51800 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.06■■□□□ 1.76
CLCNKAP51800 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLCNKAP51800 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLCNKAP51800 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.05■■□□□ 1.76
CLCNKAP51800 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CLCNKAP51800 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CLCNKAP51800 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CLCNKAP51800 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CLCNKAP51800 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CLCNKAP51800 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CLCNKAP51800 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CLCNKAP51800 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CLCNKAP51800 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
CLCNKAP51800 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CLCNKAP51800 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CLCNKAP51800 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.02■■□□□ 1.76
CLCNKAP51800 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.02■■□□□ 1.76
CLCNKAP51800 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.02■■□□□ 1.76
CLCNKAP51800 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CLCNKAP51800 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CLCNKAP51800 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CLCNKAP51800 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CLCNKAP51800 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
CLCNKAP51800 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.01■■□□□ 1.75
CLCNKAP51800 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CLCNKAP51800 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
CLCNKAP51800 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CLCNKAP51800 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.99■■□□□ 1.75
CLCNKAP51800 AC108673.1-201ENST00000510422 1159 ntBASIC25.98■■□□□ 1.75
CLCNKAP51800 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.97■■□□□ 1.75
CLCNKAP51800 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CLCNKAP51800 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
CLCNKAP51800 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CLCNKAP51800 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CLCNKAP51800 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.96■■□□□ 1.75
CLCNKAP51800 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
CLCNKAP51800 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CLCNKAP51800 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
CLCNKAP51800 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CLCNKAP51800 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.92■■□□□ 1.74
CLCNKAP51800 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CLCNKAP51800 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.91■■□□□ 1.74
CLCNKAP51800 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CLCNKAP51800 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CLCNKAP51800 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CLCNKAP51800 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.91■■□□□ 1.74
CLCNKAP51800 MIR6090-201ENST00000622481 60 ntBASIC25.9■■□□□ 1.74
CLCNKAP51800 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.89■■□□□ 1.74
CLCNKAP51800 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
CLCNKAP51800 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CLCNKAP51800 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
CLCNKAP51800 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CLCNKAP51800 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CLCNKAP51800 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
CLCNKAP51800 ABHD17AP4-201ENST00000411545 909 ntBASIC25.88■■□□□ 1.73
CLCNKAP51800 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CLCNKAP51800 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CLCNKAP51800 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CLCNKAP51800 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.86■■□□□ 1.73
CLCNKAP51800 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CLCNKAP51800 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.86■■□□□ 1.73
CLCNKAP51800 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.86■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms