Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
USP11P51784 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
USP11P51784 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
USP11P51784 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
USP11P51784 MIR3665-201ENST00000578708 105 ntBASIC30.37■■■□□ 2.45
USP11P51784 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
USP11P51784 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
USP11P51784 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
USP11P51784 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.35■■■□□ 2.45
USP11P51784 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
USP11P51784 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
USP11P51784 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
USP11P51784 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
USP11P51784 AL162393.1-201ENST00000437852 946 ntBASIC30.34■■■□□ 2.45
USP11P51784 DUX4L28-201ENST00000623687 678 ntBASIC30.34■■■□□ 2.45
USP11P51784 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
USP11P51784 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
USP11P51784 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
USP11P51784 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.32■■■□□ 2.44
USP11P51784 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
USP11P51784 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
USP11P51784 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.3■■■□□ 2.44
USP11P51784 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
USP11P51784 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.29■■■□□ 2.44
USP11P51784 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
USP11P51784 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
USP11P51784 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.27■■■□□ 2.44
USP11P51784 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
USP11P51784 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.44
USP11P51784 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.26■■■□□ 2.43
USP11P51784 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.26■■■□□ 2.43
USP11P51784 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
USP11P51784 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
USP11P51784 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.25■■■□□ 2.43
USP11P51784 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.24■■■□□ 2.43
USP11P51784 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
USP11P51784 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.23■■■□□ 2.43
USP11P51784 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.23■■■□□ 2.43
USP11P51784 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.23■■■□□ 2.43
USP11P51784 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
USP11P51784 RPS2P35-201ENST00000443417 897 ntBASIC30.22■■■□□ 2.43
USP11P51784 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.21■■■□□ 2.43
USP11P51784 AC087741.3-201ENST00000624270 1347 ntBASIC30.21■■■□□ 2.43
USP11P51784 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
USP11P51784 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.42
USP11P51784 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.2■■■□□ 2.42
USP11P51784 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
USP11P51784 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
USP11P51784 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
USP11P51784 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
USP11P51784 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
USP11P51784 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.18■■■□□ 2.42
USP11P51784 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.17■■■□□ 2.42
USP11P51784 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
USP11P51784 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
USP11P51784 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
USP11P51784 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
USP11P51784 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
USP11P51784 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.14■■■□□ 2.42
USP11P51784 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.14■■■□□ 2.42
USP11P51784 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.14■■■□□ 2.42
USP11P51784 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
USP11P51784 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
USP11P51784 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
USP11P51784 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.13■■■□□ 2.41
USP11P51784 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.12■■■□□ 2.41
USP11P51784 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
USP11P51784 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
USP11P51784 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
USP11P51784 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
USP11P51784 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
USP11P51784 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
USP11P51784 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
USP11P51784 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
USP11P51784 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.09■■■□□ 2.41
USP11P51784 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
USP11P51784 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
USP11P51784 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
USP11P51784 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.07■■■□□ 2.4
USP11P51784 AL135925.1-201ENST00000605920 1701 ntBASIC30.06■■■□□ 2.4
USP11P51784 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.06■■■□□ 2.4
USP11P51784 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.06■■■□□ 2.4
USP11P51784 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
USP11P51784 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.05■■■□□ 2.4
USP11P51784 AC044849.2-201ENST00000606596 710 ntBASIC30.05■■■□□ 2.4
USP11P51784 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.04■■■□□ 2.4
USP11P51784 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
USP11P51784 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.04■■■□□ 2.4
USP11P51784 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
USP11P51784 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
USP11P51784 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
USP11P51784 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
USP11P51784 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
USP11P51784 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.01■■■□□ 2.39
USP11P51784 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
USP11P51784 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
USP11P51784 AC010864.1-201ENST00000609407 1511 ntBASIC30■■■□□ 2.39
USP11P51784 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
USP11P51784 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
USP11P51784 AC108673.1-201ENST00000510422 1159 ntBASIC29.98■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms