Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
HMGCLP35914 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
HMGCLP35914 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
HMGCLP35914 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
HMGCLP35914 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.72■■□□□ 1.87
HMGCLP35914 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.71■■□□□ 1.87
HMGCLP35914 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
HMGCLP35914 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
HMGCLP35914 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
HMGCLP35914 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
HMGCLP35914 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
HMGCLP35914 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
HMGCLP35914 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
HMGCLP35914 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
HMGCLP35914 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.66■■□□□ 1.86
HMGCLP35914 MIR762-201ENST00000390236 83 ntBASIC26.66■■□□□ 1.86
HMGCLP35914 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.66■■□□□ 1.86
HMGCLP35914 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.66■■□□□ 1.86
HMGCLP35914 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.66■■□□□ 1.86
HMGCLP35914 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
HMGCLP35914 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
HMGCLP35914 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.65■■□□□ 1.86
HMGCLP35914 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
HMGCLP35914 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
HMGCLP35914 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.62■■□□□ 1.85
HMGCLP35914 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
HMGCLP35914 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.62■■□□□ 1.85
HMGCLP35914 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
HMGCLP35914 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
HMGCLP35914 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
HMGCLP35914 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
HMGCLP35914 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
HMGCLP35914 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
HMGCLP35914 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
HMGCLP35914 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
HMGCLP35914 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
HMGCLP35914 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.58■■□□□ 1.84
HMGCLP35914 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
HMGCLP35914 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
HMGCLP35914 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.56■■□□□ 1.84
HMGCLP35914 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
HMGCLP35914 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.56■■□□□ 1.84
HMGCLP35914 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.55■■□□□ 1.84
HMGCLP35914 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
HMGCLP35914 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
HMGCLP35914 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
HMGCLP35914 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
HMGCLP35914 AP006261.1-201ENST00000584783 668 ntBASIC26.53■■□□□ 1.84
HMGCLP35914 AC005559.1-201ENST00000589661 871 ntBASIC26.53■■□□□ 1.84
HMGCLP35914 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
HMGCLP35914 AL135925.1-201ENST00000605920 1701 ntBASIC26.52■■□□□ 1.84
HMGCLP35914 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.52■■□□□ 1.84
HMGCLP35914 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
HMGCLP35914 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.5■■□□□ 1.83
HMGCLP35914 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.5■■□□□ 1.83
HMGCLP35914 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
HMGCLP35914 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
HMGCLP35914 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.48■■□□□ 1.83
HMGCLP35914 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.48■■□□□ 1.83
HMGCLP35914 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
HMGCLP35914 MIR3665-201ENST00000578708 105 ntBASIC26.47■■□□□ 1.83
HMGCLP35914 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.46■■□□□ 1.83
HMGCLP35914 DUX4L28-201ENST00000623687 678 ntBASIC26.46■■□□□ 1.83
HMGCLP35914 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
HMGCLP35914 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
HMGCLP35914 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
HMGCLP35914 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.44■■□□□ 1.82
HMGCLP35914 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.44■■□□□ 1.82
HMGCLP35914 ST7-AS1-201ENST00000456775 1889 ntBASIC26.44■■□□□ 1.82
HMGCLP35914 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
HMGCLP35914 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.43■■□□□ 1.82
HMGCLP35914 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.43■■□□□ 1.82
HMGCLP35914 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
HMGCLP35914 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
HMGCLP35914 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
HMGCLP35914 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
HMGCLP35914 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
HMGCLP35914 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
HMGCLP35914 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
HMGCLP35914 AL162393.1-201ENST00000437852 946 ntBASIC26.4■■□□□ 1.82
HMGCLP35914 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.4■■□□□ 1.82
HMGCLP35914 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
HMGCLP35914 AC010864.1-201ENST00000609407 1511 ntBASIC26.39■■□□□ 1.82
HMGCLP35914 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
HMGCLP35914 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.39■■□□□ 1.81
HMGCLP35914 ABCB10P1-201ENST00000614297 2181 ntBASIC26.39■■□□□ 1.81
HMGCLP35914 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.38■■□□□ 1.81
HMGCLP35914 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
HMGCLP35914 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.37■■□□□ 1.81
HMGCLP35914 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
HMGCLP35914 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
HMGCLP35914 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.36■■□□□ 1.81
HMGCLP35914 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
HMGCLP35914 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
HMGCLP35914 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.36■■□□□ 1.81
HMGCLP35914 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
HMGCLP35914 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
HMGCLP35914 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
HMGCLP35914 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
HMGCLP35914 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.35■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms