Protein–RNA interactions for Protein: P23968

VMA16, V-type proton ATPase subunit c'', yeastyeast

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA16P23968 LSC2YGR244C 1284 nt7.59□□□□□ -1.19
VMA16P23968 TIR3YIL011W 810 nt7.59□□□□□ -1.19
VMA16P23968 BET2YPR176C 978 nt7.59□□□□□ -1.19
VMA16P23968 UTR1YJR049C 1593 nt7.59□□□□□ -1.2
VMA16P23968 LAS17YOR181W 1902 nt7.58□□□□□ -1.2
VMA16P23968 GNP1YDR508C 1992 nt7.57□□□□□ -1.2
VMA16P23968 MIM1YOL026C 342 nt7.57□□□□□ -1.2
VMA16P23968 HXT10YFL011W 1641 nt7.56□□□□□ -1.2
VMA16P23968 NDE1YMR145C 1683 nt7.56□□□□□ -1.2
VMA16P23968 FRT1YOR324C 1809 nt7.55□□□□□ -1.2
VMA16P23968 SHH4YLR164W 507 nt7.54□□□□□ -1.2
VMA16P23968 YRF1-2YER190W 5046 nt7.53□□□□□ -1.2
VMA16P23968 ATG15YCR068W 1563 nt7.53□□□□□ -1.2
VMA16P23968 POM34YLR018C 900 nt7.52□□□□□ -1.21
VMA16P23968 NAT4YMR069W 858 nt7.52□□□□□ -1.21
VMA16P23968 YDR010CYDR010C 333 nt7.51□□□□□ -1.21
VMA16P23968 PRO1YDR300C 1287 nt7.51□□□□□ -1.21
VMA16P23968 MIR1YJR077C 936 nt7.51□□□□□ -1.21
VMA16P23968 CCT2YIL142W 1584 nt7.5□□□□□ -1.21
VMA16P23968 PMA2YPL036W 2844 nt7.5□□□□□ -1.21
VMA16P23968 tD(GUC)BtD(GUC)B 72 nt7.5□□□□□ -1.21
VMA16P23968 tD(GUC)DtD(GUC)D 72 nt7.5□□□□□ -1.21
VMA16P23968 tD(GUC)G1tD(GUC)G1 72 nt7.5□□□□□ -1.21
VMA16P23968 tD(GUC)G2tD(GUC)G2 72 nt7.5□□□□□ -1.21
VMA16P23968 tD(GUC)I1tD(GUC)I1 72 nt7.5□□□□□ -1.21
VMA16P23968 tD(GUC)I2tD(GUC)I2 72 nt7.5□□□□□ -1.21
VMA16P23968 tD(GUC)J1tD(GUC)J1 72 nt7.5□□□□□ -1.21
VMA16P23968 tD(GUC)J2tD(GUC)J2 72 nt7.5□□□□□ -1.21
VMA16P23968 tD(GUC)J3tD(GUC)J3 72 nt7.5□□□□□ -1.21
VMA16P23968 tD(GUC)J4tD(GUC)J4 72 nt7.5□□□□□ -1.21
VMA16P23968 tD(GUC)KtD(GUC)K 72 nt7.5□□□□□ -1.21
VMA16P23968 tD(GUC)L1tD(GUC)L1 72 nt7.5□□□□□ -1.21
VMA16P23968 tD(GUC)L2tD(GUC)L2 72 nt7.5□□□□□ -1.21
VMA16P23968 tD(GUC)MtD(GUC)M 72 nt7.5□□□□□ -1.21
VMA16P23968 tD(GUC)OtD(GUC)O 72 nt7.5□□□□□ -1.21
VMA16P23968 BEM1YBR200W 1656 nt7.5□□□□□ -1.21
VMA16P23968 YML089CYML089C 369 nt7.49□□□□□ -1.21
VMA16P23968 HXT1YHR094C 1713 nt7.49□□□□□ -1.21
VMA16P23968 THI74YDR438W 1113 nt7.48□□□□□ -1.21
VMA16P23968 SHB17YKR043C 816 nt7.48□□□□□ -1.21
VMA16P23968 MDM35YKL053C-A 261 nt7.47□□□□□ -1.21
VMA16P23968 HBS1YKR084C 1836 nt7.47□□□□□ -1.21
VMA16P23968 DUS3YLR401C 2007 nt7.47□□□□□ -1.21
VMA16P23968 MTG2YHR168W 1557 nt7.46□□□□□ -1.21
VMA16P23968 SFA1YDL168W 1161 nt7.46□□□□□ -1.22
VMA16P23968 GGC1YDL198C 903 nt7.46□□□□□ -1.22
VMA16P23968 YFL015W-AYFL015W-A 318 nt7.46□□□□□ -1.22
VMA16P23968 LSB6YJL100W 1824 nt7.45□□□□□ -1.22
VMA16P23968 RET2YFR051C 1641 nt7.45□□□□□ -1.22
VMA16P23968 MSF1YPR047W 1410 nt7.44□□□□□ -1.22
VMA16P23968 YHL019W-AYHL019W-A 594 nt7.44□□□□□ -1.22
VMA16P23968 PHO23YNL097C 993 nt7.44□□□□□ -1.22
VMA16P23968 YPL041CYPL041C 624 nt7.44□□□□□ -1.22
VMA16P23968 UBA4YHR111W 1323 nt7.44□□□□□ -1.22
VMA16P23968 POP2YNR052C 1302 nt7.44□□□□□ -1.22
VMA16P23968 CTF3YLR381W 2202 nt7.44□□□□□ -1.22
VMA16P23968 CCR4YAL021C 2514 nt7.44□□□□□ -1.22
VMA16P23968 SSL2YIL143C 2532 nt7.43□□□□□ -1.22
VMA16P23968 DBP1YPL119C 1854 nt7.43□□□□□ -1.22
VMA16P23968 DIF1YLR437C 402 nt7.42□□□□□ -1.22
VMA16P23968 AAC3YBR085W 924 nt7.42□□□□□ -1.22
VMA16P23968 YCR087WYCR087W 516 nt7.41□□□□□ -1.22
VMA16P23968 YSR3YKR053C 1215 nt7.41□□□□□ -1.22
VMA16P23968 TOM6YOR045W 186 nt7.41□□□□□ -1.22
VMA16P23968 CWC15YDR163W 528 nt7.4□□□□□ -1.22
VMA16P23968 YMR244WYMR244W 1068 nt7.4□□□□□ -1.22
VMA16P23968 AGP3YFL055W 1677 nt7.4□□□□□ -1.23
VMA16P23968 SBA1YKL117W 651 nt7.39□□□□□ -1.23
VMA16P23968 PHO89YBR296C 1725 nt7.38□□□□□ -1.23
VMA16P23968 TIF6YPR016C 738 nt7.38□□□□□ -1.23
VMA16P23968 LIP1YMR298W 453 nt7.37□□□□□ -1.23
VMA16P23968 GND1YHR183W 1470 nt7.36□□□□□ -1.23
VMA16P23968 SAM1YLR180W 1149 nt7.36□□□□□ -1.23
VMA16P23968 AIM34YMR003W 597 nt7.36□□□□□ -1.23
VMA16P23968 HIP1YGR191W 1812 nt7.36□□□□□ -1.23
VMA16P23968 SED1YDR077W 1017 nt7.35□□□□□ -1.23
VMA16P23968 YGL034CYGL034C 366 nt7.35□□□□□ -1.23
VMA16P23968 SHY1YGR112W 1170 nt7.35□□□□□ -1.23
VMA16P23968 MLS1YNL117W 1665 nt7.35□□□□□ -1.23
VMA16P23968 ADE16YLR028C 1776 nt7.34□□□□□ -1.23
VMA16P23968 MRP20YDR405W 792 nt7.34□□□□□ -1.23
VMA16P23968 PEX2YJL210W 816 nt7.34□□□□□ -1.23
VMA16P23968 COQ2YNR041C 1119 nt7.34□□□□□ -1.23
VMA16P23968 YIL108WYIL108W 2091 nt7.34□□□□□ -1.23
VMA16P23968 YAR028WYAR028W 705 nt7.33□□□□□ -1.24
VMA16P23968 YEL023CYEL023C 2049 nt7.32□□□□□ -1.24
VMA16P23968 TOP3YLR234W 1971 nt7.31□□□□□ -1.24
VMA16P23968 MET28YIR017C 564 nt7.31□□□□□ -1.24
VMA16P23968 TOA2YKL058W 369 nt7.31□□□□□ -1.24
VMA16P23968 LSR1LSR1 1175 nt7.31□□□□□ -1.24
VMA16P23968 AFG2YLR397C 2343 nt7.3□□□□□ -1.24
VMA16P23968 XYL2YLR070C 1071 nt7.3□□□□□ -1.24
VMA16P23968 AIM45YPR004C 1035 nt7.3□□□□□ -1.24
VMA16P23968 SAM2YDR502C 1155 nt7.29□□□□□ -1.24
VMA16P23968 URA6YKL024C 615 nt7.29□□□□□ -1.24
VMA16P23968 GID8YMR135C 1368 nt7.29□□□□□ -1.24
VMA16P23968 PFS2YNL317W 1398 nt7.29□□□□□ -1.24
VMA16P23968 FLR1YBR008C 1647 nt7.28□□□□□ -1.24
VMA16P23968 LSM5YER146W 282 nt7.28□□□□□ -1.24
VMA16P23968 HXT12YIL170W 1374 nt7.28□□□□□ -1.24
Retrieved 100 of 7,029 protein–RNA pairs in 38.9 ms