Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
FOXN1O15353 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC32.21■■■□□ 2.75
FOXN1O15353 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
FOXN1O15353 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
FOXN1O15353 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
FOXN1O15353 DUX4L11-201ENST00000611504 1267 ntBASIC32.18■■■□□ 2.74
FOXN1O15353 DUX4L12-201ENST00000614593 1267 ntBASIC32.18■■■□□ 2.74
FOXN1O15353 DUX4L14-201ENST00000621227 1267 ntBASIC32.18■■■□□ 2.74
FOXN1O15353 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC32.17■■■□□ 2.74
FOXN1O15353 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
FOXN1O15353 ABHD17AP5-201ENST00000580133 923 ntBASIC32.16■■■□□ 2.74
FOXN1O15353 RARRES2P2-201ENST00000394842 485 ntBASIC32.14■■■□□ 2.74
FOXN1O15353 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC32.14■■■□□ 2.74
FOXN1O15353 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC32.14■■■□□ 2.73
FOXN1O15353 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
FOXN1O15353 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC32.13■■■□□ 2.73
FOXN1O15353 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
FOXN1O15353 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
FOXN1O15353 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
FOXN1O15353 CIB2-204ENST00000557846 934 ntTSL 3 BASIC32.11■■■□□ 2.73
FOXN1O15353 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC32.09■■■□□ 2.73
FOXN1O15353 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
FOXN1O15353 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
FOXN1O15353 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC32.07■■■□□ 2.72
FOXN1O15353 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC32.06■■■□□ 2.72
FOXN1O15353 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC32.06■■■□□ 2.72
FOXN1O15353 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC32.04■■■□□ 2.72
FOXN1O15353 LINC01971-201ENST00000617888 1048 ntBASIC32.04■■■□□ 2.72
FOXN1O15353 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
FOXN1O15353 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
FOXN1O15353 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
FOXN1O15353 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC32.02■■■□□ 2.72
FOXN1O15353 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC32.02■■■□□ 2.72
FOXN1O15353 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
FOXN1O15353 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
FOXN1O15353 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
FOXN1O15353 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.99■■■□□ 2.71
FOXN1O15353 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.99■■■□□ 2.71
FOXN1O15353 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.99■■■□□ 2.71
FOXN1O15353 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.97■■■□□ 2.71
FOXN1O15353 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.97■■■□□ 2.71
FOXN1O15353 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
FOXN1O15353 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
FOXN1O15353 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC31.95■■■□□ 2.71
FOXN1O15353 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
FOXN1O15353 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
FOXN1O15353 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.93■■■□□ 2.7
FOXN1O15353 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.92■■■□□ 2.7
FOXN1O15353 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
FOXN1O15353 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7
FOXN1O15353 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
FOXN1O15353 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
FOXN1O15353 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.87■■■□□ 2.69
FOXN1O15353 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
FOXN1O15353 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
FOXN1O15353 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
FOXN1O15353 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
FOXN1O15353 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
FOXN1O15353 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
FOXN1O15353 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
FOXN1O15353 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.84■■■□□ 2.69
FOXN1O15353 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.82■■■□□ 2.68
FOXN1O15353 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
FOXN1O15353 MIR6090-201ENST00000622481 60 ntBASIC31.8■■■□□ 2.68
FOXN1O15353 AC012354.3-201ENST00000623734 483 ntBASIC31.8■■■□□ 2.68
FOXN1O15353 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
FOXN1O15353 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.79■■■□□ 2.68
FOXN1O15353 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
FOXN1O15353 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
FOXN1O15353 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.79■■■□□ 2.68
FOXN1O15353 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.78■■■□□ 2.68
FOXN1O15353 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
FOXN1O15353 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31.77■■■□□ 2.68
FOXN1O15353 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
FOXN1O15353 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
FOXN1O15353 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.76■■■□□ 2.67
FOXN1O15353 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
FOXN1O15353 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.76■■■□□ 2.67
FOXN1O15353 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
FOXN1O15353 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
FOXN1O15353 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
FOXN1O15353 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
FOXN1O15353 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
FOXN1O15353 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
FOXN1O15353 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.74■■■□□ 2.67
FOXN1O15353 WASH5P-204ENST00000632292 975 ntBASIC31.74■■■□□ 2.67
FOXN1O15353 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
FOXN1O15353 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.73■■■□□ 2.67
FOXN1O15353 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
FOXN1O15353 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
FOXN1O15353 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
FOXN1O15353 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
FOXN1O15353 AC108673.1-201ENST00000510422 1159 ntBASIC31.72■■■□□ 2.67
FOXN1O15353 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
FOXN1O15353 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.72■■■□□ 2.67
FOXN1O15353 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
FOXN1O15353 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
FOXN1O15353 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.71■■■□□ 2.67
FOXN1O15353 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.71■■■□□ 2.67
FOXN1O15353 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC31.71■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms