Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.25■□□□□ 0.67
SMIM9A6NGZ8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM9A6NGZ8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMIM9A6NGZ8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.24■□□□□ 0.67
SMIM9A6NGZ8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMIM9A6NGZ8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMIM9A6NGZ8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM9A6NGZ8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM9A6NGZ8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SMIM9A6NGZ8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
SMIM9A6NGZ8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.22■□□□□ 0.67
SMIM9A6NGZ8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM9A6NGZ8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM9A6NGZ8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMIM9A6NGZ8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.21■□□□□ 0.67
SMIM9A6NGZ8 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SMIM9A6NGZ8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMIM9A6NGZ8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMIM9A6NGZ8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM9A6NGZ8 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM9A6NGZ8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.18■□□□□ 0.66
SMIM9A6NGZ8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SMIM9A6NGZ8 AL162393.1-201ENST00000437852 946 ntBASIC19.18■□□□□ 0.66
SMIM9A6NGZ8 DUX4L28-201ENST00000623687 678 ntBASIC19.18■□□□□ 0.66
SMIM9A6NGZ8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM9A6NGZ8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.17■□□□□ 0.66
SMIM9A6NGZ8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM9A6NGZ8 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM9A6NGZ8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM9A6NGZ8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM9A6NGZ8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM9A6NGZ8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM9A6NGZ8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM9A6NGZ8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.16■□□□□ 0.66
SMIM9A6NGZ8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMIM9A6NGZ8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.15■□□□□ 0.66
SMIM9A6NGZ8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.15■□□□□ 0.66
SMIM9A6NGZ8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SMIM9A6NGZ8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMIM9A6NGZ8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMIM9A6NGZ8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMIM9A6NGZ8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMIM9A6NGZ8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMIM9A6NGZ8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMIM9A6NGZ8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMIM9A6NGZ8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMIM9A6NGZ8 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
SMIM9A6NGZ8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMIM9A6NGZ8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
SMIM9A6NGZ8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.12■□□□□ 0.65
SMIM9A6NGZ8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMIM9A6NGZ8 AC044849.2-201ENST00000606596 710 ntBASIC19.12■□□□□ 0.65
SMIM9A6NGZ8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMIM9A6NGZ8 AC087741.3-201ENST00000624270 1347 ntBASIC19.11■□□□□ 0.65
SMIM9A6NGZ8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMIM9A6NGZ8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.11■□□□□ 0.65
SMIM9A6NGZ8 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMIM9A6NGZ8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMIM9A6NGZ8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.1■□□□□ 0.65
SMIM9A6NGZ8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMIM9A6NGZ8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.1■□□□□ 0.65
SMIM9A6NGZ8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19.1■□□□□ 0.65
SMIM9A6NGZ8 RPS2P35-201ENST00000443417 897 ntBASIC19.09■□□□□ 0.65
SMIM9A6NGZ8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMIM9A6NGZ8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMIM9A6NGZ8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SMIM9A6NGZ8 AC108673.1-201ENST00000510422 1159 ntBASIC19.08■□□□□ 0.64
SMIM9A6NGZ8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.08■□□□□ 0.64
SMIM9A6NGZ8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.08■□□□□ 0.64
SMIM9A6NGZ8 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SMIM9A6NGZ8 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMIM9A6NGZ8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMIM9A6NGZ8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMIM9A6NGZ8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMIM9A6NGZ8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.05■□□□□ 0.64
SMIM9A6NGZ8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.05■□□□□ 0.64
SMIM9A6NGZ8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SMIM9A6NGZ8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMIM9A6NGZ8 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMIM9A6NGZ8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.04■□□□□ 0.64
SMIM9A6NGZ8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMIM9A6NGZ8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMIM9A6NGZ8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SMIM9A6NGZ8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMIM9A6NGZ8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMIM9A6NGZ8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SMIM9A6NGZ8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SMIM9A6NGZ8 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMIM9A6NGZ8 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMIM9A6NGZ8 AL135925.1-201ENST00000605920 1701 ntBASIC19.02■□□□□ 0.63
SMIM9A6NGZ8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
SMIM9A6NGZ8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.02■□□□□ 0.63
SMIM9A6NGZ8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SMIM9A6NGZ8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMIM9A6NGZ8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.01■□□□□ 0.63
SMIM9A6NGZ8 AC010864.1-201ENST00000609407 1511 ntBASIC19■□□□□ 0.63
SMIM9A6NGZ8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SMIM9A6NGZ8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19■□□□□ 0.63
SMIM9A6NGZ8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMIM9A6NGZ8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms