Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TRAV8-2A0A0B4J237 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.18■□□□□ 0.82
TRAV8-2A0A0B4J237 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV8-2A0A0B4J237 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.17■□□□□ 0.82
TRAV8-2A0A0B4J237 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV8-2A0A0B4J237 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV8-2A0A0B4J237 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV8-2A0A0B4J237 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV8-2A0A0B4J237 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV8-2A0A0B4J237 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.16■□□□□ 0.82
TRAV8-2A0A0B4J237 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV8-2A0A0B4J237 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV8-2A0A0B4J237 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV8-2A0A0B4J237 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.15■□□□□ 0.82
TRAV8-2A0A0B4J237 AL133380.1-201ENST00000506013 324 ntBASIC20.15■□□□□ 0.82
TRAV8-2A0A0B4J237 WASH5P-204ENST00000632292 975 ntBASIC20.15■□□□□ 0.82
TRAV8-2A0A0B4J237 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TRAV8-2A0A0B4J237 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TRAV8-2A0A0B4J237 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV8-2A0A0B4J237 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV8-2A0A0B4J237 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV8-2A0A0B4J237 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV8-2A0A0B4J237 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.13■□□□□ 0.81
TRAV8-2A0A0B4J237 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TRAV8-2A0A0B4J237 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV8-2A0A0B4J237 AL135925.1-201ENST00000605920 1701 ntBASIC20.11■□□□□ 0.81
TRAV8-2A0A0B4J237 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV8-2A0A0B4J237 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV8-2A0A0B4J237 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV8-2A0A0B4J237 AC139426.1-201ENST00000568218 2529 ntBASIC20.1■□□□□ 0.81
TRAV8-2A0A0B4J237 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV8-2A0A0B4J237 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV8-2A0A0B4J237 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV8-2A0A0B4J237 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV8-2A0A0B4J237 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV8-2A0A0B4J237 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.06■□□□□ 0.8
TRAV8-2A0A0B4J237 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV8-2A0A0B4J237 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.06■□□□□ 0.8
TRAV8-2A0A0B4J237 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
TRAV8-2A0A0B4J237 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TRAV8-2A0A0B4J237 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.05■□□□□ 0.8
TRAV8-2A0A0B4J237 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.05■□□□□ 0.8
TRAV8-2A0A0B4J237 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
TRAV8-2A0A0B4J237 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TRAV8-2A0A0B4J237 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAV8-2A0A0B4J237 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV8-2A0A0B4J237 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.03■□□□□ 0.8
TRAV8-2A0A0B4J237 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV8-2A0A0B4J237 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV8-2A0A0B4J237 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAV8-2A0A0B4J237 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TRAV8-2A0A0B4J237 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV8-2A0A0B4J237 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TRAV8-2A0A0B4J237 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TRAV8-2A0A0B4J237 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV8-2A0A0B4J237 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV8-2A0A0B4J237 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20■□□□□ 0.79
TRAV8-2A0A0B4J237 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAV8-2A0A0B4J237 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20■□□□□ 0.79
TRAV8-2A0A0B4J237 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV8-2A0A0B4J237 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV8-2A0A0B4J237 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV8-2A0A0B4J237 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV8-2A0A0B4J237 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV8-2A0A0B4J237 RARRES2P7-201ENST00000567349 469 ntBASIC19.98■□□□□ 0.79
TRAV8-2A0A0B4J237 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV8-2A0A0B4J237 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TRAV8-2A0A0B4J237 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV8-2A0A0B4J237 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.97■□□□□ 0.79
TRAV8-2A0A0B4J237 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV8-2A0A0B4J237 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV8-2A0A0B4J237 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV8-2A0A0B4J237 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TRAV8-2A0A0B4J237 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV8-2A0A0B4J237 SETD8P1-201ENST00000623146 1180 ntBASIC19.94■□□□□ 0.78
TRAV8-2A0A0B4J237 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV8-2A0A0B4J237 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.93■□□□□ 0.78
TRAV8-2A0A0B4J237 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV8-2A0A0B4J237 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV8-2A0A0B4J237 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV8-2A0A0B4J237 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV8-2A0A0B4J237 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV8-2A0A0B4J237 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV8-2A0A0B4J237 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV8-2A0A0B4J237 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV8-2A0A0B4J237 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TRAV8-2A0A0B4J237 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.91■□□□□ 0.78
TRAV8-2A0A0B4J237 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.91■□□□□ 0.78
TRAV8-2A0A0B4J237 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TRAV8-2A0A0B4J237 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAV8-2A0A0B4J237 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV8-2A0A0B4J237 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV8-2A0A0B4J237 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV8-2A0A0B4J237 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV8-2A0A0B4J237 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV8-2A0A0B4J237 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV8-2A0A0B4J237 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV8-2A0A0B4J237 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV8-2A0A0B4J237 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
TRAV8-2A0A0B4J237 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms