Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV6-8A0A0A6YYG3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC18.52■□□□□ 0.56
TRBV6-8A0A0A6YYG3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV6-8A0A0A6YYG3 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV6-8A0A0A6YYG3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV6-8A0A0A6YYG3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV6-8A0A0A6YYG3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV6-8A0A0A6YYG3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV6-8A0A0A6YYG3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV6-8A0A0A6YYG3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.49■□□□□ 0.55
TRBV6-8A0A0A6YYG3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV6-8A0A0A6YYG3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV6-8A0A0A6YYG3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
TRBV6-8A0A0A6YYG3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV6-8A0A0A6YYG3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TRBV6-8A0A0A6YYG3 AL135925.1-201ENST00000605920 1701 ntBASIC18.47■□□□□ 0.55
TRBV6-8A0A0A6YYG3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TRBV6-8A0A0A6YYG3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.47■□□□□ 0.55
TRBV6-8A0A0A6YYG3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV6-8A0A0A6YYG3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV6-8A0A0A6YYG3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV6-8A0A0A6YYG3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18.46■□□□□ 0.55
TRBV6-8A0A0A6YYG3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
TRBV6-8A0A0A6YYG3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV6-8A0A0A6YYG3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRBV6-8A0A0A6YYG3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV6-8A0A0A6YYG3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV6-8A0A0A6YYG3 RARRES2P7-201ENST00000567349 469 ntBASIC18.45■□□□□ 0.54
TRBV6-8A0A0A6YYG3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV6-8A0A0A6YYG3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBV6-8A0A0A6YYG3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV6-8A0A0A6YYG3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
TRBV6-8A0A0A6YYG3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV6-8A0A0A6YYG3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.42■□□□□ 0.54
TRBV6-8A0A0A6YYG3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV6-8A0A0A6YYG3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV6-8A0A0A6YYG3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV6-8A0A0A6YYG3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV6-8A0A0A6YYG3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV6-8A0A0A6YYG3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV6-8A0A0A6YYG3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV6-8A0A0A6YYG3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRBV6-8A0A0A6YYG3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV6-8A0A0A6YYG3 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRBV6-8A0A0A6YYG3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV6-8A0A0A6YYG3 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRBV6-8A0A0A6YYG3 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV6-8A0A0A6YYG3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
TRBV6-8A0A0A6YYG3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV6-8A0A0A6YYG3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TRBV6-8A0A0A6YYG3 SETD8P1-201ENST00000623146 1180 ntBASIC18.38■□□□□ 0.53
TRBV6-8A0A0A6YYG3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV6-8A0A0A6YYG3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV6-8A0A0A6YYG3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TRBV6-8A0A0A6YYG3 AC139426.1-201ENST00000568218 2529 ntBASIC18.37■□□□□ 0.53
TRBV6-8A0A0A6YYG3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV6-8A0A0A6YYG3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV6-8A0A0A6YYG3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV6-8A0A0A6YYG3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TRBV6-8A0A0A6YYG3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV6-8A0A0A6YYG3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV6-8A0A0A6YYG3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV6-8A0A0A6YYG3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV6-8A0A0A6YYG3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRBV6-8A0A0A6YYG3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV6-8A0A0A6YYG3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV6-8A0A0A6YYG3 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV6-8A0A0A6YYG3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRBV6-8A0A0A6YYG3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.34■□□□□ 0.53
TRBV6-8A0A0A6YYG3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV6-8A0A0A6YYG3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV6-8A0A0A6YYG3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV6-8A0A0A6YYG3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV6-8A0A0A6YYG3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
TRBV6-8A0A0A6YYG3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRBV6-8A0A0A6YYG3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC18.33■□□□□ 0.52
TRBV6-8A0A0A6YYG3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV6-8A0A0A6YYG3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.32■□□□□ 0.52
TRBV6-8A0A0A6YYG3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV6-8A0A0A6YYG3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV6-8A0A0A6YYG3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.31■□□□□ 0.52
TRBV6-8A0A0A6YYG3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV6-8A0A0A6YYG3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV6-8A0A0A6YYG3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV6-8A0A0A6YYG3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV6-8A0A0A6YYG3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV6-8A0A0A6YYG3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC18.3■□□□□ 0.52
TRBV6-8A0A0A6YYG3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.29■□□□□ 0.52
TRBV6-8A0A0A6YYG3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV6-8A0A0A6YYG3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.29■□□□□ 0.52
TRBV6-8A0A0A6YYG3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV6-8A0A0A6YYG3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
TRBV6-8A0A0A6YYG3 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV6-8A0A0A6YYG3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV6-8A0A0A6YYG3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV6-8A0A0A6YYG3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.25■□□□□ 0.51
TRBV6-8A0A0A6YYG3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV6-8A0A0A6YYG3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV6-8A0A0A6YYG3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV6-8A0A0A6YYG3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms