Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 AC142086.6-201ENST00000621154 1765 ntBASIC17.55■□□□□ 0.4
IGKV2-28A0A075B6P5 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC17.55■□□□□ 0.4
IGKV2-28A0A075B6P5 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV2-28A0A075B6P5 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
IGKV2-28A0A075B6P5 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV2-28A0A075B6P5 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
IGKV2-28A0A075B6P5 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IGKV2-28A0A075B6P5 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
IGKV2-28A0A075B6P5 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
IGKV2-28A0A075B6P5 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
IGKV2-28A0A075B6P5 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
IGKV2-28A0A075B6P5 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
IGKV2-28A0A075B6P5 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IGKV2-28A0A075B6P5 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IGKV2-28A0A075B6P5 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IGKV2-28A0A075B6P5 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IGKV2-28A0A075B6P5 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IGKV2-28A0A075B6P5 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IGKV2-28A0A075B6P5 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IGKV2-28A0A075B6P5 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IGKV2-28A0A075B6P5 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
IGKV2-28A0A075B6P5 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC17.49■□□□□ 0.39
IGKV2-28A0A075B6P5 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
IGKV2-28A0A075B6P5 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IGKV2-28A0A075B6P5 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IGKV2-28A0A075B6P5 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
IGKV2-28A0A075B6P5 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
IGKV2-28A0A075B6P5 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IGKV2-28A0A075B6P5 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IGKV2-28A0A075B6P5 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
IGKV2-28A0A075B6P5 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IGKV2-28A0A075B6P5 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IGKV2-28A0A075B6P5 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IGKV2-28A0A075B6P5 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IGKV2-28A0A075B6P5 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC17.46■□□□□ 0.39
IGKV2-28A0A075B6P5 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
IGKV2-28A0A075B6P5 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
IGKV2-28A0A075B6P5 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
IGKV2-28A0A075B6P5 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.45■□□□□ 0.38
IGKV2-28A0A075B6P5 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IGKV2-28A0A075B6P5 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
IGKV2-28A0A075B6P5 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC17.44■□□□□ 0.38
IGKV2-28A0A075B6P5 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IGKV2-28A0A075B6P5 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
IGKV2-28A0A075B6P5 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV2-28A0A075B6P5 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV2-28A0A075B6P5 ZNRF2P1-201ENST00000441407 443 ntBASIC17.43■□□□□ 0.38
IGKV2-28A0A075B6P5 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
IGKV2-28A0A075B6P5 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGKV2-28A0A075B6P5 MVK-208ENST00000539696 608 ntTSL 5 BASIC17.42■□□□□ 0.38
IGKV2-28A0A075B6P5 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGKV2-28A0A075B6P5 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
IGKV2-28A0A075B6P5 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV2-28A0A075B6P5 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.4■□□□□ 0.38
IGKV2-28A0A075B6P5 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC17.4■□□□□ 0.38
IGKV2-28A0A075B6P5 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV2-28A0A075B6P5 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV2-28A0A075B6P5 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC17.4■□□□□ 0.38
IGKV2-28A0A075B6P5 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGKV2-28A0A075B6P5 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGKV2-28A0A075B6P5 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
IGKV2-28A0A075B6P5 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IGKV2-28A0A075B6P5 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IGKV2-28A0A075B6P5 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV2-28A0A075B6P5 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC17.38■□□□□ 0.37
IGKV2-28A0A075B6P5 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV2-28A0A075B6P5 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV2-28A0A075B6P5 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV2-28A0A075B6P5 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV2-28A0A075B6P5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV2-28A0A075B6P5 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV2-28A0A075B6P5 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV2-28A0A075B6P5 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV2-28A0A075B6P5 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV2-28A0A075B6P5 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV2-28A0A075B6P5 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV2-28A0A075B6P5 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC17.36■□□□□ 0.37
IGKV2-28A0A075B6P5 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV2-28A0A075B6P5 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV2-28A0A075B6P5 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV2-28A0A075B6P5 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
IGKV2-28A0A075B6P5 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV2-28A0A075B6P5 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IGKV2-28A0A075B6P5 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IGKV2-28A0A075B6P5 AL121749.1-202ENST00000609313 2153 ntBASIC17.33■□□□□ 0.37
IGKV2-28A0A075B6P5 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IGKV2-28A0A075B6P5 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC17.33■□□□□ 0.36
IGKV2-28A0A075B6P5 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.33■□□□□ 0.36
IGKV2-28A0A075B6P5 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IGKV2-28A0A075B6P5 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
IGKV2-28A0A075B6P5 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IGKV2-28A0A075B6P5 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV2-28A0A075B6P5 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV2-28A0A075B6P5 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV2-28A0A075B6P5 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV2-28A0A075B6P5 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
IGKV2-28A0A075B6P5 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
IGKV2-28A0A075B6P5 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGKV2-28A0A075B6P5 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGKV2-28A0A075B6P5 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms