Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ITPR1-219ENST00000544951 4131 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P04436 IL7-210ENST00000541183 2020 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
P04436 MED8-203ENST00000372457 1924 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
P04436 VCL-201ENST00000211998 5490 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04436 OLAH-201ENST00000378217 1767 ntTSL 2 BASIC9.68□□□□□ -0.86
P04436 GYS1-201ENST00000263276 3378 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P04436 AP2A1-201ENST00000354293 3388 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04436 DDX25-202ENST00000525943 1646 ntTSL 5 BASIC9.68□□□□□ -0.86
P04436 TIGIT-201ENST00000383671 2967 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04436 PAMR1-206ENST00000615849 2801 ntTSL 2 BASIC9.68□□□□□ -0.86
P04436 DCAF8-202ENST00000368073 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04436 CASP3-201ENST00000308394 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04436 SMUG1-201ENST00000243112 627 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P04436 TSACC-203ENST00000368253 512 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04436 ZNF35-203ENST00000399560 564 ntTSL 4 BASIC9.68□□□□□ -0.86
P04436 AL163953.1-201ENST00000436530 726 ntTSL 3 BASIC9.68□□□□□ -0.86
P04436 ZNF35-206ENST00000453164 581 ntTSL 3 BASIC9.68□□□□□ -0.86
P04436 TCL6-210ENST00000495696 789 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P04436 AP003478.1-201ENST00000504616 833 ntBASIC9.68□□□□□ -0.86
P04436 LINC02065-201ENST00000509924 562 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P04436 AP000866.4-201ENST00000533974 448 ntBASIC9.68□□□□□ -0.86
P04436 BTNL2-205ENST00000544175 845 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P04436 AC117569.1-202ENST00000581532 557 ntTSL 5 BASIC9.68□□□□□ -0.86
P04436 LINC00907-207ENST00000591381 1291 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P04436 AC027644.2-201ENST00000603786 240 ntBASIC9.68□□□□□ -0.86
P04436 GPSM3-210ENST00000619085 1177 ntTSL 5 BASIC9.68□□□□□ -0.86
P04436 FAM170A-207ENST00000620555 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04436 LINC00969-272ENST00000626569 857 ntTSL 5 BASIC9.68□□□□□ -0.86
P04436 LINC00969-278ENST00000626870 851 ntTSL 5 BASIC9.68□□□□□ -0.86
P04436 MPP4-207ENST00000428900 2320 ntTSL 2 BASIC9.68□□□□□ -0.86
P04436 GCNT1-203ENST00000444201 5476 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04436 RPL22L1-201ENST00000295830 2190 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04436 LINC01845-201ENST00000518418 2012 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P04436 TCF21-201ENST00000237316 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04436 KIFAP3-201ENST00000361580 2957 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04436 INSC-203ENST00000424273 2943 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P04436 LINC00885-201ENST00000457079 1828 ntTSL 2 BASIC9.68□□□□□ -0.86
P04436 CELF2-202ENST00000399850 7085 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
P04436 ATP13A1-201ENST00000291503 3483 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
P04436 AL355602.1-201ENST00000641472 3402 ntBASIC9.68□□□□□ -0.86
P04436 GPR156-202ENST00000461057 2525 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04436 LINC02201-202ENST00000511194 1651 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P04436 SRSF7-201ENST00000313117 2489 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04436 PDE6B-201ENST00000255622 3280 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04436 YTHDF1P1-201ENST00000515217 1646 ntBASIC9.67□□□□□ -0.86
P04436 ERG-203ENST00000398905 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04436 FAM60A-201ENST00000337682 3163 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04436 SLC6A12-201ENST00000359674 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04436 TMEM169-202ENST00000406027 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04436 RIPOR2-201ENST00000259698 5471 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04436 KLHL18-201ENST00000232766 4620 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04436 MARCH10-202ENST00000456609 3057 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04436 RBM4-206ENST00000483858 1548 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P04436 LMOD3-202ENST00000475434 2238 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
P04436 CTAGE5-206ENST00000396158 3695 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P04436 DDX31-205ENST00000438527 2814 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04436 BTN3A1-203ENST00000414912 2077 ntTSL 2 BASIC9.67□□□□□ -0.86
P04436 CASC19-229ENST00000641418 1373 ntBASIC9.67□□□□□ -0.86
P04436 CYP11B1-201ENST00000292427 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04436 TTC8-204ENST00000354441 1342 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P04436 ATF2-207ENST00000409833 1335 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P04436 CYP4F9P-201ENST00000589847 1339 ntBASIC9.67□□□□□ -0.86
P04436 PRAMEF13-202ENST00000638454 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04436 PSD4-205ENST00000441564 11234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04436 B3GALT5-201ENST00000343118 2606 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
P04436 C16orf62-201ENST00000251143 3894 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P04436 SEC31A-228ENST00000509142 3861 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
P04436 SMIM23-201ENST00000330910 468 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
P04436 AL353662.2-201ENST00000372214 645 ntBASIC9.67□□□□□ -0.86
P04436 PRPS1-201ENST00000372418 942 ntTSL 3 BASIC9.67□□□□□ -0.86
P04436 OTX2-202ENST00000408990 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04436 TUBB8P11-201ENST00000415481 1058 ntBASIC9.67□□□□□ -0.86
P04436 AL139220.2-215ENST00000453688 654 ntTSL 5 BASIC9.67□□□□□ -0.86
P04436 AL158071.3-201ENST00000457976 506 ntTSL 2 BASIC9.67□□□□□ -0.86
P04436 RN7SL683P-201ENST00000460552 270 ntBASIC9.67□□□□□ -0.86
P04436 RPS10P7-202ENST00000482594 494 ntBASIC9.67□□□□□ -0.86
P04436 RPL6P7-201ENST00000488873 853 ntBASIC9.67□□□□□ -0.86
P04436 SLC25A5P9-201ENST00000509905 910 ntBASIC9.67□□□□□ -0.86
P04436 STX17-AS1-201ENST00000529965 548 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P04436 CDCA3-208ENST00000540683 985 ntTSL 2 BASIC9.67□□□□□ -0.86
P04436 TDGF1-205ENST00000542931 1192 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
P04436 RNF41-211ENST00000552656 1193 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P04436 AC132938.1-201ENST00000566971 360 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P04436 AC009081.1-201ENST00000567862 565 ntTSL 4 BASIC9.67□□□□□ -0.86
P04436 LINC02127-202ENST00000568607 897 ntTSL 2 BASIC9.67□□□□□ -0.86
P04436 AL031709.1-201ENST00000569831 435 ntTSL 5 BASIC9.67□□□□□ -0.86
P04436 AC002551.1-201ENST00000569881 592 ntTSL 3 BASIC9.67□□□□□ -0.86
P04436 NAA60-220ENST00000573580 758 ntTSL 4 BASIC9.67□□□□□ -0.86
P04436 C1orf186-203ENST00000582070 1145 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
P04436 AC010524.1-201ENST00000596488 494 ntTSL 3 BASIC9.67□□□□□ -0.86
P04436 Metazoa_SRP.72-201ENST00000617458 278 ntBASIC9.67□□□□□ -0.86
P04436 HTT-AS1_2.1-201ENST00000621529 175 ntBASIC9.67□□□□□ -0.86
P04436 ZRANB2-AS2-224ENST00000626344 400 ntTSL 5 BASIC9.67□□□□□ -0.86
P04436 AC060814.6-201ENST00000626448 752 ntTSL 3 BASIC9.67□□□□□ -0.86
P04436 TMCO1-209ENST00000628579 477 ntTSL 5 BASIC9.67□□□□□ -0.86
P04436 AC007241.1-201ENST00000634531 933 ntBASIC9.67□□□□□ -0.86
P04436 AL031283.2-201ENST00000428747 3105 ntTSL 2 BASIC9.67□□□□□ -0.86
P04436 PRDM10-207ENST00000528746 6182 ntTSL 5 BASIC9.67□□□□□ -0.86
P04436 GLDC-208ENST00000638661 1796 ntTSL 5 BASIC9.67□□□□□ -0.86
P04436 HNRNPA2B1-208ENST00000618183 3539 ntTSL 5 BASIC9.67□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms