RNA–Protein interactions for RNA: ENST00000444201.6

GCNT1-203, Transcript of glucosaminyl (N-acetyl) transferase 1, core 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCNT1, Length 5,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT1-203ENST00000444201 NISCHQ9Y2I1 1504 aa21.13■□□□□ 0.97
GCNT1-203ENST00000444201 SHROOM4Q9ULL8 1493 aa18.9■□□□□ 0.62
GCNT1-203ENST00000444201 DCAF8L2P0C7V8 631 aa18.78■□□□□ 0.6
GCNT1-203ENST00000444201 SUPT5HO00267 1087 aaKnown RBP18.75■□□□□ 0.59
GCNT1-203ENST00000444201 ZCCHC6Q5VYS8 1495 aaKnown RBP17.78■□□□□ 0.44
GCNT1-203ENST00000444201 PCGF6Q9BYE7 350 aa17.76■□□□□ 0.43
GCNT1-203ENST00000444201 CHIC1Q5VXU3 224 aa17.76■□□□□ 0.43
GCNT1-203ENST00000444201 CCDC180Q9P1Z9 1646 aa17.67■□□□□ 0.42
GCNT1-203ENST00000444201 EHMT2Q96KQ7 1210 aa17.55■□□□□ 0.4
GCNT1-203ENST00000444201 HRCP23327 699 aa17.5■□□□□ 0.39
GCNT1-203ENST00000444201 LOC105371045A0A1W2PR82 267 aa17.46■□□□□ 0.39
GCNT1-203ENST00000444201 FAM9AQ8IZU1 332 aaPredicted RBP17.45■□□□□ 0.38
GCNT1-203ENST00000444201 MYO15BQ96JP2 1530 aa17.38■□□□□ 0.37
GCNT1-203ENST00000444201 TRIM41Q8WV44 630 aa17.37■□□□□ 0.37
GCNT1-203ENST00000444201 PPARGC1BQ86YN6 1023 aaKnown RBP17.25■□□□□ 0.35
GCNT1-203ENST00000444201 TRIM26Q12899 539 aaPredicted RBP17.22■□□□□ 0.35
GCNT1-203ENST00000444201 SCRIBQ14160 1630 aa17.07■□□□□ 0.32
GCNT1-203ENST00000444201 ZEB1P37275 1124 aaPredicted RBP17.05■□□□□ 0.32
GCNT1-203ENST00000444201 DCAF1Q9Y4B6 1507 aa17.04■□□□□ 0.32
GCNT1-203ENST00000444201 ABCC9O60706 1549 aa16.98■□□□□ 0.31
GCNT1-203ENST00000444201 TTBK1Q5TCY1 1321 aaPredicted RBP16.98■□□□□ 0.31
GCNT1-203ENST00000444201 RSF1Q96T23 1441 aaPredicted RBP16.85■□□□□ 0.29
GCNT1-203ENST00000444201 CCER1Q8TC90 406 aaPredicted RBP16.83■□□□□ 0.29
GCNT1-203ENST00000444201 UBTFP17480 764 aaKnown RBP16.73■□□□□ 0.27
GCNT1-203ENST00000444201 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.64■□□□□ 0.25
GCNT1-203ENST00000444201 RB1CC1Q8TDY2 1594 aa16.63■□□□□ 0.25
GCNT1-203ENST00000444201 RANGAP1P46060 587 aaPredicted RBP16.62■□□□□ 0.25
GCNT1-203ENST00000444201 APLP2Q06481 763 aa16.62■□□□□ 0.25
GCNT1-203ENST00000444201 CECR2Q9BXF3 1484 aa16.57■□□□□ 0.24
GCNT1-203ENST00000444201 NACADO15069 1562 aa16.55■□□□□ 0.24
GCNT1-203ENST00000444201 PABPN1Q86U42 306 aaKnown RBP eCLIP16.52■□□□□ 0.23
GCNT1-203ENST00000444201 MROH2BQ7Z745 1585 aa16.47■□□□□ 0.23
GCNT1-203ENST00000444201 CENPBP07199 599 aaPredicted RBP16.45■□□□□ 0.22
GCNT1-203ENST00000444201 WIZO95785 1651 aa16.37■□□□□ 0.21
GCNT1-203ENST00000444201 HNRNPUL2Q1KMD3 747 aaKnown RBP16.37■□□□□ 0.21
GCNT1-203ENST00000444201 DIEXFQ68CQ4 756 aaKnown RBP16.35■□□□□ 0.21
GCNT1-203ENST00000444201 CSRNP3Q8WYN3 585 aa16.34■□□□□ 0.21
GCNT1-203ENST00000444201 YTHDC1Q96MU7 727 aaKnown RBP16.34■□□□□ 0.21
GCNT1-203ENST00000444201 PELP1Q8IZL8 1130 aaKnown RBP16.33■□□□□ 0.2
GCNT1-203ENST00000444201 BAZ1AQ9NRL2 1556 aaPredicted RBP16.3■□□□□ 0.2
GCNT1-203ENST00000444201 ABCC8Q09428 1581 aa16.21■□□□□ 0.19
GCNT1-203ENST00000444201 CEP162Q5TB80 1403 aa16.21■□□□□ 0.18
GCNT1-203ENST00000444201 CCDC88BA6NC98 1476 aa16.17■□□□□ 0.18
GCNT1-203ENST00000444201 SCAF1Q9H7N4 1312 aaKnown RBP16.17■□□□□ 0.18
GCNT1-203ENST00000444201 SOGA1O94964 1423 aa16.15■□□□□ 0.18
GCNT1-203ENST00000444201 ACIN1Q9UKV3 1341 aaKnown RBP16.14■□□□□ 0.17
GCNT1-203ENST00000444201 ZNF316A6NFI3 1004 aaPredicted RBP16.12■□□□□ 0.17
GCNT1-203ENST00000444201 TOP2AP11388 1531 aaKnown RBP16.11■□□□□ 0.17
GCNT1-203ENST00000444201 GTF3C3Q9Y5Q9 886 aa16.11■□□□□ 0.17
GCNT1-203ENST00000444201 TNIKQ9UKE5 1360 aa16.1■□□□□ 0.17
GCNT1-203ENST00000444201 ATP1B4Q9UN42 357 aaPredicted RBP16.09■□□□□ 0.17
GCNT1-203ENST00000444201 ITGAEP38570 1179 aa16.08■□□□□ 0.16
GCNT1-203ENST00000444201 EEA1Q15075 1411 aa16.07■□□□□ 0.16
GCNT1-203ENST00000444201 GOLGA3Q08378 1498 aa16.07■□□□□ 0.16
GCNT1-203ENST00000444201 WRNQ14191 1432 aaPredicted RBP eCLIP16.05■□□□□ 0.16
GCNT1-203ENST00000444201 NEUROD1Q13562 356 aa16.05■□□□□ 0.16
GCNT1-203ENST00000444201 SMARCA4P51532 1647 aa16.04■□□□□ 0.16
GCNT1-203ENST00000444201 CLIP1P30622 1438 aa15.99■□□□□ 0.15
GCNT1-203ENST00000444201 SMARCA2P51531 1590 aa15.96■□□□□ 0.14
GCNT1-203ENST00000444201 RUSC2Q8N2Y8 1516 aa15.95■□□□□ 0.14
GCNT1-203ENST00000444201 CEP164Q9UPV0 1460 aa15.93■□□□□ 0.14
GCNT1-203ENST00000444201 BAZ1BQ9UIG0 1483 aaKnown RBP15.92■□□□□ 0.14
GCNT1-203ENST00000444201 MIER1Q8N108 512 aa15.83■□□□□ 0.12
GCNT1-203ENST00000444201 FAM50AQ14320 339 aaKnown RBP15.8■□□□□ 0.12
GCNT1-203ENST00000444201 VPS8Q8N3P4 1428 aa15.75■□□□□ 0.11
GCNT1-203ENST00000444201 P3H3Q8IVL6 736 aa15.73■□□□□ 0.11
GCNT1-203ENST00000444201 ATAD2BQ9ULI0 1458 aa15.72■□□□□ 0.11
GCNT1-203ENST00000444201 RAPGEF2Q9Y4G8 1499 aa15.71■□□□□ 0.11
GCNT1-203ENST00000444201 EIF4G1Q04637 1599 aaKnown RBP15.71■□□□□ 0.11
GCNT1-203ENST00000444201 SYNJ1O43426 1573 aa15.65■□□□□ 0.1
GCNT1-203ENST00000444201 KIF27Q86VH2 1401 aa15.65■□□□□ 0.1
GCNT1-203ENST00000444201 UNC13AQ9UPW8 1703 aa15.64■□□□□ 0.09
GCNT1-203ENST00000444201 MYT1Q01538 1121 aa15.63■□□□□ 0.09
GCNT1-203ENST00000444201 KANK4Q5T7N3 995 aaPredicted RBP15.62■□□□□ 0.09
GCNT1-203ENST00000444201 NEFLP07196 543 aa15.61■□□□□ 0.09
GCNT1-203ENST00000444201 KIF21BO75037 1637 aa15.58■□□□□ 0.09
GCNT1-203ENST00000444201 BICRAQ9NZM4 1560 aa15.55■□□□□ 0.08
GCNT1-203ENST00000444201 CLSPNQ9HAW4 1339 aa15.52■□□□□ 0.07
GCNT1-203ENST00000444201 BCANQ96GW7 911 aa15.52■□□□□ 0.07
GCNT1-203ENST00000444201 CCNB3Q8WWL7 1395 aa15.5■□□□□ 0.07
GCNT1-203ENST00000444201 DDX10Q13206 875 aaKnown RBP15.48■□□□□ 0.07
GCNT1-203ENST00000444201 CUX2O14529 1486 aa15.48■□□□□ 0.07
GCNT1-203ENST00000444201 ANP32CO43423 234 aa15.45■□□□□ 0.06
GCNT1-203ENST00000444201 DHX57Q6P158 1386 aaKnown RBP15.45■□□□□ 0.06
GCNT1-203ENST00000444201 TRIM52Q96A61 297 aa15.44■□□□□ 0.06
GCNT1-203ENST00000444201 CARMIL1Q5VZK9 1371 aa15.42■□□□□ 0.06
GCNT1-203ENST00000444201 TOP2BQ02880 1626 aa15.42■□□□□ 0.06
GCNT1-203ENST00000444201 HIRIP3Q9BW71 556 aaPredicted RBP15.42■□□□□ 0.06
GCNT1-203ENST00000444201 PEG3Q9GZU2 1588 aa15.42■□□□□ 0.06
GCNT1-203ENST00000444201 SIN3AQ96ST3 1273 aa15.4■□□□□ 0.06
GCNT1-203ENST00000444201 ARID3CA6NKF2 412 aa15.37■□□□□ 0.05
GCNT1-203ENST00000444201 ARAP1Q96P48 1450 aa15.37■□□□□ 0.05
GCNT1-203ENST00000444201 RAB3GAP2Q9H2M9 1393 aa15.36■□□□□ 0.05
GCNT1-203ENST00000444201 TONSLQ96HA7 1378 aa15.36■□□□□ 0.05
GCNT1-203ENST00000444201 ERICH3Q5RHP9 1530 aa15.35■□□□□ 0.05
GCNT1-203ENST00000444201 FKBP8Q14318 412 aa15.34■□□□□ 0.05
GCNT1-203ENST00000444201 PRXQ9BXM0 1461 aa15.33■□□□□ 0.05
GCNT1-203ENST00000444201 SETD5Q9C0A6 1442 aa15.33■□□□□ 0.04
GCNT1-203ENST00000444201 MTUS2Q5JR59 1369 aa15.33■□□□□ 0.04
GCNT1-203ENST00000444201 CUX1P39880 1505 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms