Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 AC092028.1-203ENST00000608262 953 ntBASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 LINC01529-204ENST00000636474 1715 ntBASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD3-BMI1R4GMX3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COMMD3-BMI1R4GMX3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
COMMD3-BMI1R4GMX3 KRT125P-201ENST00000546827 989 ntBASIC19.64■□□□□ 0.73
COMMD3-BMI1R4GMX3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.64■□□□□ 0.73
COMMD3-BMI1R4GMX3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.64■□□□□ 0.73
COMMD3-BMI1R4GMX3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COMMD3-BMI1R4GMX3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COMMD3-BMI1R4GMX3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
COMMD3-BMI1R4GMX3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
COMMD3-BMI1R4GMX3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.64■□□□□ 0.73
COMMD3-BMI1R4GMX3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COMMD3-BMI1R4GMX3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COMMD3-BMI1R4GMX3 AP005212.1-201ENST00000581547 1997 ntBASIC19.64■□□□□ 0.73
COMMD3-BMI1R4GMX3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COMMD3-BMI1R4GMX3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COMMD3-BMI1R4GMX3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
COMMD3-BMI1R4GMX3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3-BMI1R4GMX3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3-BMI1R4GMX3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3-BMI1R4GMX3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3-BMI1R4GMX3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3-BMI1R4GMX3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3-BMI1R4GMX3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3-BMI1R4GMX3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3-BMI1R4GMX3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
COMMD3-BMI1R4GMX3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3-BMI1R4GMX3 Z92544.1-202ENST00000571933 1220 ntBASIC19.63■□□□□ 0.73
COMMD3-BMI1R4GMX3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3-BMI1R4GMX3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
COMMD3-BMI1R4GMX3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3-BMI1R4GMX3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3-BMI1R4GMX3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3-BMI1R4GMX3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3-BMI1R4GMX3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3-BMI1R4GMX3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3-BMI1R4GMX3 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.63■□□□□ 0.73
COMMD3-BMI1R4GMX3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3-BMI1R4GMX3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
COMMD3-BMI1R4GMX3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
COMMD3-BMI1R4GMX3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.62■□□□□ 0.73
COMMD3-BMI1R4GMX3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD3-BMI1R4GMX3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD3-BMI1R4GMX3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD3-BMI1R4GMX3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD3-BMI1R4GMX3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
COMMD3-BMI1R4GMX3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
COMMD3-BMI1R4GMX3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD3-BMI1R4GMX3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD3-BMI1R4GMX3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD3-BMI1R4GMX3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD3-BMI1R4GMX3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD3-BMI1R4GMX3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
COMMD3-BMI1R4GMX3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD3-BMI1R4GMX3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
COMMD3-BMI1R4GMX3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.62■□□□□ 0.73
COMMD3-BMI1R4GMX3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD3-BMI1R4GMX3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD3-BMI1R4GMX3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
COMMD3-BMI1R4GMX3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
COMMD3-BMI1R4GMX3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
COMMD3-BMI1R4GMX3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.61■□□□□ 0.73
COMMD3-BMI1R4GMX3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.61■□□□□ 0.73
COMMD3-BMI1R4GMX3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
COMMD3-BMI1R4GMX3 FP325331.1-202ENST00000623531 1380 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms