Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGB1Q9Y5G3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGB1Q9Y5G3 AC079089.2-201ENST00000531211 1277 ntBASIC19.21■□□□□ 0.67
PCDHGB1Q9Y5G3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB1Q9Y5G3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGB1Q9Y5G3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PCDHGB1Q9Y5G3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
PCDHGB1Q9Y5G3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB1Q9Y5G3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB1Q9Y5G3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.21■□□□□ 0.67
PCDHGB1Q9Y5G3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGB1Q9Y5G3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB1Q9Y5G3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB1Q9Y5G3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.2■□□□□ 0.66
PCDHGB1Q9Y5G3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB1Q9Y5G3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
PCDHGB1Q9Y5G3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.2■□□□□ 0.66
PCDHGB1Q9Y5G3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB1Q9Y5G3 AC092028.1-203ENST00000608262 953 ntBASIC19.2■□□□□ 0.66
PCDHGB1Q9Y5G3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB1Q9Y5G3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB1Q9Y5G3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PCDHGB1Q9Y5G3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB1Q9Y5G3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB1Q9Y5G3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGB1Q9Y5G3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB1Q9Y5G3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB1Q9Y5G3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGB1Q9Y5G3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDHGB1Q9Y5G3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PCDHGB1Q9Y5G3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCDHGB1Q9Y5G3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB1Q9Y5G3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB1Q9Y5G3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDHGB1Q9Y5G3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGB1Q9Y5G3 KRT125P-201ENST00000546827 989 ntBASIC19.19■□□□□ 0.66
PCDHGB1Q9Y5G3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PCDHGB1Q9Y5G3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB1Q9Y5G3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB1Q9Y5G3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB1Q9Y5G3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB1Q9Y5G3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB1Q9Y5G3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB1Q9Y5G3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB1Q9Y5G3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 AC006128.1-201ENST00000624704 1661 ntBASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB1Q9Y5G3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGB1Q9Y5G3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB1Q9Y5G3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB1Q9Y5G3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB1Q9Y5G3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
PCDHGB1Q9Y5G3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB1Q9Y5G3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB1Q9Y5G3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB1Q9Y5G3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHGB1Q9Y5G3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGB1Q9Y5G3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHGB1Q9Y5G3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PCDHGB1Q9Y5G3 MTDHP2-201ENST00000601468 714 ntBASIC19.17■□□□□ 0.66
PCDHGB1Q9Y5G3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PCDHGB1Q9Y5G3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PCDHGB1Q9Y5G3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
PCDHGB1Q9Y5G3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
PCDHGB1Q9Y5G3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGB1Q9Y5G3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB1Q9Y5G3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB1Q9Y5G3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB1Q9Y5G3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PCDHGB1Q9Y5G3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PCDHGB1Q9Y5G3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB1Q9Y5G3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
PCDHGB1Q9Y5G3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
PCDHGB1Q9Y5G3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHGB1Q9Y5G3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms