Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.77■□□□□ 0.28
LSM4Q9Y4Z0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.77■□□□□ 0.28
LSM4Q9Y4Z0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LSM4Q9Y4Z0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.77■□□□□ 0.28
LSM4Q9Y4Z0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LSM4Q9Y4Z0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.77■□□□□ 0.28
LSM4Q9Y4Z0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.77■□□□□ 0.28
LSM4Q9Y4Z0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LSM4Q9Y4Z0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
LSM4Q9Y4Z0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.77■□□□□ 0.28
LSM4Q9Y4Z0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LSM4Q9Y4Z0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LSM4Q9Y4Z0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LSM4Q9Y4Z0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LSM4Q9Y4Z0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LSM4Q9Y4Z0 AL049796.1-201ENST00000565336 1766 ntBASIC16.77■□□□□ 0.27
LSM4Q9Y4Z0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.77■□□□□ 0.27
LSM4Q9Y4Z0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.77■□□□□ 0.27
LSM4Q9Y4Z0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LSM4Q9Y4Z0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LSM4Q9Y4Z0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LSM4Q9Y4Z0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LSM4Q9Y4Z0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LSM4Q9Y4Z0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
LSM4Q9Y4Z0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LSM4Q9Y4Z0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.76■□□□□ 0.27
LSM4Q9Y4Z0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LSM4Q9Y4Z0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LSM4Q9Y4Z0 RARRES2P11-201ENST00000635158 484 ntBASIC16.76■□□□□ 0.27
LSM4Q9Y4Z0 AC068587.7-201ENST00000641602 218 ntBASIC16.76■□□□□ 0.27
LSM4Q9Y4Z0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LSM4Q9Y4Z0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LSM4Q9Y4Z0 FEM1AP1-201ENST00000431297 1995 ntBASIC16.76■□□□□ 0.27
LSM4Q9Y4Z0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LSM4Q9Y4Z0 AL121603.2-201ENST00000557373 2117 ntBASIC16.76■□□□□ 0.27
LSM4Q9Y4Z0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LSM4Q9Y4Z0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LSM4Q9Y4Z0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LSM4Q9Y4Z0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LSM4Q9Y4Z0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.76■□□□□ 0.27
LSM4Q9Y4Z0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LSM4Q9Y4Z0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LSM4Q9Y4Z0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.75■□□□□ 0.27
LSM4Q9Y4Z0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
LSM4Q9Y4Z0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LSM4Q9Y4Z0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LSM4Q9Y4Z0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LSM4Q9Y4Z0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.75■□□□□ 0.27
LSM4Q9Y4Z0 YBX1P1-201ENST00000445822 960 ntBASIC16.75■□□□□ 0.27
LSM4Q9Y4Z0 AC126544.1-201ENST00000580842 1059 ntBASIC16.75■□□□□ 0.27
LSM4Q9Y4Z0 AC022517.1-201ENST00000592429 346 ntBASIC16.75■□□□□ 0.27
LSM4Q9Y4Z0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.75■□□□□ 0.27
LSM4Q9Y4Z0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LSM4Q9Y4Z0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LSM4Q9Y4Z0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.75■□□□□ 0.27
LSM4Q9Y4Z0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.75■□□□□ 0.27
LSM4Q9Y4Z0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.75■□□□□ 0.27
LSM4Q9Y4Z0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LSM4Q9Y4Z0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
LSM4Q9Y4Z0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LSM4Q9Y4Z0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.75■□□□□ 0.27
LSM4Q9Y4Z0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LSM4Q9Y4Z0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.74■□□□□ 0.27
LSM4Q9Y4Z0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LSM4Q9Y4Z0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.74■□□□□ 0.27
LSM4Q9Y4Z0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LSM4Q9Y4Z0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.74■□□□□ 0.27
LSM4Q9Y4Z0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.74■□□□□ 0.27
LSM4Q9Y4Z0 AC090192.1-201ENST00000517740 490 ntBASIC16.74■□□□□ 0.27
LSM4Q9Y4Z0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.74■□□□□ 0.27
LSM4Q9Y4Z0 pRNA.6-201ENST00000610482 90 ntBASIC16.74■□□□□ 0.27
LSM4Q9Y4Z0 pRNA.5-201ENST00000612139 90 ntBASIC16.74■□□□□ 0.27
LSM4Q9Y4Z0 pRNA.11-201ENST00000618423 90 ntBASIC16.74■□□□□ 0.27
LSM4Q9Y4Z0 pRNA.13-201ENST00000619112 90 ntBASIC16.74■□□□□ 0.27
LSM4Q9Y4Z0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.74■□□□□ 0.27
LSM4Q9Y4Z0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.74■□□□□ 0.27
LSM4Q9Y4Z0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LSM4Q9Y4Z0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LSM4Q9Y4Z0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LSM4Q9Y4Z0 AC092667.1-201ENST00000434301 2586 ntBASIC16.74■□□□□ 0.27
LSM4Q9Y4Z0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LSM4Q9Y4Z0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LSM4Q9Y4Z0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
LSM4Q9Y4Z0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.73■□□□□ 0.27
LSM4Q9Y4Z0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
LSM4Q9Y4Z0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LSM4Q9Y4Z0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LSM4Q9Y4Z0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
LSM4Q9Y4Z0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LSM4Q9Y4Z0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LSM4Q9Y4Z0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.73■□□□□ 0.27
LSM4Q9Y4Z0 KRT18P5-201ENST00000436075 1291 ntBASIC16.73■□□□□ 0.27
LSM4Q9Y4Z0 IKBKGP1-201ENST00000612193 1073 ntBASIC16.73■□□□□ 0.27
LSM4Q9Y4Z0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LSM4Q9Y4Z0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.73■□□□□ 0.27
LSM4Q9Y4Z0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LSM4Q9Y4Z0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LSM4Q9Y4Z0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LSM4Q9Y4Z0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LSM4Q9Y4Z0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms