Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDHA4Q9UN74 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHA4Q9UN74 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHA4Q9UN74 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDHA4Q9UN74 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHA4Q9UN74 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHA4Q9UN74 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHA4Q9UN74 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHA4Q9UN74 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC24.09■■□□□ 1.45
PCDHA4Q9UN74 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHA4Q9UN74 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC24.09■■□□□ 1.45
PCDHA4Q9UN74 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.09■■□□□ 1.45
PCDHA4Q9UN74 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.09■■□□□ 1.45
PCDHA4Q9UN74 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHA4Q9UN74 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.09■■□□□ 1.45
PCDHA4Q9UN74 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHA4Q9UN74 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC24.09■■□□□ 1.45
PCDHA4Q9UN74 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHA4Q9UN74 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHA4Q9UN74 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHA4Q9UN74 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
PCDHA4Q9UN74 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHA4Q9UN74 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
PCDHA4Q9UN74 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHA4Q9UN74 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHA4Q9UN74 GXYLT1P2-201ENST00000433312 1230 ntBASIC24.08■■□□□ 1.45
PCDHA4Q9UN74 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHA4Q9UN74 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
PCDHA4Q9UN74 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC24.08■■□□□ 1.45
PCDHA4Q9UN74 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC24.08■■□□□ 1.44
PCDHA4Q9UN74 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
PCDHA4Q9UN74 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PCDHA4Q9UN74 AC007375.3-201ENST00000600936 2314 ntBASIC24.07■■□□□ 1.44
PCDHA4Q9UN74 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
PCDHA4Q9UN74 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHA4Q9UN74 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHA4Q9UN74 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDHA4Q9UN74 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDHA4Q9UN74 KRT18P20-201ENST00000548986 1279 ntBASIC24.07■■□□□ 1.44
PCDHA4Q9UN74 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHA4Q9UN74 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDHA4Q9UN74 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHA4Q9UN74 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHA4Q9UN74 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDHA4Q9UN74 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDHA4Q9UN74 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC24.07■■□□□ 1.44
PCDHA4Q9UN74 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHA4Q9UN74 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC24.07■■□□□ 1.44
PCDHA4Q9UN74 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHA4Q9UN74 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHA4Q9UN74 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHA4Q9UN74 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC24.06■■□□□ 1.44
PCDHA4Q9UN74 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHA4Q9UN74 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
PCDHA4Q9UN74 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHA4Q9UN74 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC24.06■■□□□ 1.44
PCDHA4Q9UN74 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHA4Q9UN74 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHA4Q9UN74 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.06■■□□□ 1.44
PCDHA4Q9UN74 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC24.06■■□□□ 1.44
PCDHA4Q9UN74 SLC7A5P2-201ENST00000553010 536 ntBASIC24.06■■□□□ 1.44
PCDHA4Q9UN74 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.06■■□□□ 1.44
PCDHA4Q9UN74 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.06■■□□□ 1.44
PCDHA4Q9UN74 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
PCDHA4Q9UN74 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
PCDHA4Q9UN74 FEM1AP4-201ENST00000443167 1987 ntBASIC24.05■■□□□ 1.44
PCDHA4Q9UN74 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHA4Q9UN74 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC24.05■■□□□ 1.44
PCDHA4Q9UN74 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHA4Q9UN74 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHA4Q9UN74 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
PCDHA4Q9UN74 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC24.05■■□□□ 1.44
PCDHA4Q9UN74 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.05■■□□□ 1.44
PCDHA4Q9UN74 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHA4Q9UN74 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHA4Q9UN74 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC24.05■■□□□ 1.44
PCDHA4Q9UN74 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHA4Q9UN74 PARN-205ENST00000539279 1557 ntTSL 2 BASIC24.04■■□□□ 1.44
PCDHA4Q9UN74 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHA4Q9UN74 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHA4Q9UN74 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.04■■□□□ 1.44
PCDHA4Q9UN74 AL024507.2-201ENST00000606070 2574 ntBASIC24.04■■□□□ 1.44
PCDHA4Q9UN74 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHA4Q9UN74 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
PCDHA4Q9UN74 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHA4Q9UN74 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHA4Q9UN74 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
PCDHA4Q9UN74 KRT16P2-201ENST00000414673 1423 ntBASIC24.03■■□□□ 1.44
PCDHA4Q9UN74 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
PCDHA4Q9UN74 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC24.03■■□□□ 1.44
PCDHA4Q9UN74 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
PCDHA4Q9UN74 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC24.03■■□□□ 1.44
PCDHA4Q9UN74 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.03■■□□□ 1.44
PCDHA4Q9UN74 AC120498.10-201ENST00000621827 505 ntBASIC24.03■■□□□ 1.44
PCDHA4Q9UN74 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHA4Q9UN74 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
PCDHA4Q9UN74 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHA4Q9UN74 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHA4Q9UN74 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHA4Q9UN74 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms