Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC42SE2Q9NRR3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 GABARAPL3-202ENST00000624044 1851 ntBASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDC42SE2Q9NRR3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 PLK5-205ENST00000642079 1969 ntBASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC42SE2Q9NRR3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms