Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 AC136428.2-201ENST00000563187 214 ntBASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 HNRNPLP2-201ENST00000568980 1570 ntBASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMCO4Q9NRQ5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMCO4Q9NRQ5 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMCO4Q9NRQ5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMCO4Q9NRQ5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMCO4Q9NRQ5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.54■□□□□ 0.24
SMCO4Q9NRQ5 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMCO4Q9NRQ5 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SMCO4Q9NRQ5 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMCO4Q9NRQ5 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SMCO4Q9NRQ5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMCO4Q9NRQ5 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMCO4Q9NRQ5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.54■□□□□ 0.24
SMCO4Q9NRQ5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SMCO4Q9NRQ5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.54■□□□□ 0.24
SMCO4Q9NRQ5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMCO4Q9NRQ5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.54■□□□□ 0.24
SMCO4Q9NRQ5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SMCO4Q9NRQ5 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SMCO4Q9NRQ5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMCO4Q9NRQ5 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SMCO4Q9NRQ5 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SMCO4Q9NRQ5 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMCO4Q9NRQ5 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMCO4Q9NRQ5 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SMCO4Q9NRQ5 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.53■□□□□ 0.24
SMCO4Q9NRQ5 AC148477.6-201ENST00000623746 465 ntBASIC16.53■□□□□ 0.24
SMCO4Q9NRQ5 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SMCO4Q9NRQ5 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SMCO4Q9NRQ5 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SMCO4Q9NRQ5 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.53■□□□□ 0.24
SMCO4Q9NRQ5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMCO4Q9NRQ5 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.52■□□□□ 0.24
SMCO4Q9NRQ5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SMCO4Q9NRQ5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.52■□□□□ 0.24
SMCO4Q9NRQ5 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SMCO4Q9NRQ5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMCO4Q9NRQ5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMCO4Q9NRQ5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SMCO4Q9NRQ5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMCO4Q9NRQ5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.52■□□□□ 0.24
SMCO4Q9NRQ5 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SMCO4Q9NRQ5 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMCO4Q9NRQ5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SMCO4Q9NRQ5 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.52■□□□□ 0.24
SMCO4Q9NRQ5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMCO4Q9NRQ5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.52■□□□□ 0.24
SMCO4Q9NRQ5 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMCO4Q9NRQ5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.52■□□□□ 0.23
SMCO4Q9NRQ5 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.52■□□□□ 0.23
SMCO4Q9NRQ5 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SMCO4Q9NRQ5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
SMCO4Q9NRQ5 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SMCO4Q9NRQ5 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMCO4Q9NRQ5 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMCO4Q9NRQ5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMCO4Q9NRQ5 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMCO4Q9NRQ5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMCO4Q9NRQ5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMCO4Q9NRQ5 AL049796.1-201ENST00000565336 1766 ntBASIC16.51■□□□□ 0.23
SMCO4Q9NRQ5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.51■□□□□ 0.23
SMCO4Q9NRQ5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SMCO4Q9NRQ5 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMCO4Q9NRQ5 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMCO4Q9NRQ5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMCO4Q9NRQ5 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMCO4Q9NRQ5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMCO4Q9NRQ5 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMCO4Q9NRQ5 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMCO4Q9NRQ5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMCO4Q9NRQ5 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMCO4Q9NRQ5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMCO4Q9NRQ5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SMCO4Q9NRQ5 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMCO4Q9NRQ5 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.51■□□□□ 0.23
SMCO4Q9NRQ5 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMCO4Q9NRQ5 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMCO4Q9NRQ5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMCO4Q9NRQ5 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMCO4Q9NRQ5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SMCO4Q9NRQ5 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMCO4Q9NRQ5 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.5■□□□□ 0.23
SMCO4Q9NRQ5 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SMCO4Q9NRQ5 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMCO4Q9NRQ5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms