Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRCC1Q9NPI7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRCC1Q9NPI7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRCC1Q9NPI7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRCC1Q9NPI7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.24■□□□□ 0.67
KRCC1Q9NPI7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRCC1Q9NPI7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.24■□□□□ 0.67
KRCC1Q9NPI7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
KRCC1Q9NPI7 MIR4466-201ENST00000606121 54 ntBASIC19.24■□□□□ 0.67
KRCC1Q9NPI7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
KRCC1Q9NPI7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRCC1Q9NPI7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
KRCC1Q9NPI7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRCC1Q9NPI7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
KRCC1Q9NPI7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRCC1Q9NPI7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRCC1Q9NPI7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRCC1Q9NPI7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRCC1Q9NPI7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.23■□□□□ 0.67
KRCC1Q9NPI7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRCC1Q9NPI7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRCC1Q9NPI7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
KRCC1Q9NPI7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
KRCC1Q9NPI7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRCC1Q9NPI7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRCC1Q9NPI7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.23■□□□□ 0.67
KRCC1Q9NPI7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRCC1Q9NPI7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.23■□□□□ 0.67
KRCC1Q9NPI7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
KRCC1Q9NPI7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRCC1Q9NPI7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRCC1Q9NPI7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.23■□□□□ 0.67
KRCC1Q9NPI7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.23■□□□□ 0.67
KRCC1Q9NPI7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRCC1Q9NPI7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.23■□□□□ 0.67
KRCC1Q9NPI7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
KRCC1Q9NPI7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRCC1Q9NPI7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRCC1Q9NPI7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRCC1Q9NPI7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRCC1Q9NPI7 LINC01521-201ENST00000504184 1943 ntBASIC19.22■□□□□ 0.67
KRCC1Q9NPI7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRCC1Q9NPI7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.22■□□□□ 0.67
KRCC1Q9NPI7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
KRCC1Q9NPI7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRCC1Q9NPI7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.22■□□□□ 0.67
KRCC1Q9NPI7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.22■□□□□ 0.67
KRCC1Q9NPI7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.22■□□□□ 0.67
KRCC1Q9NPI7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
KRCC1Q9NPI7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
KRCC1Q9NPI7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRCC1Q9NPI7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.22■□□□□ 0.67
KRCC1Q9NPI7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRCC1Q9NPI7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.21■□□□□ 0.67
KRCC1Q9NPI7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
KRCC1Q9NPI7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRCC1Q9NPI7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRCC1Q9NPI7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRCC1Q9NPI7 BX842568.3-201ENST00000418104 571 ntBASIC19.21■□□□□ 0.67
KRCC1Q9NPI7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.21■□□□□ 0.67
KRCC1Q9NPI7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRCC1Q9NPI7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRCC1Q9NPI7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRCC1Q9NPI7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRCC1Q9NPI7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
KRCC1Q9NPI7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRCC1Q9NPI7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRCC1Q9NPI7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRCC1Q9NPI7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
KRCC1Q9NPI7 AC131281.2-201ENST00000520478 145 ntBASIC19.2■□□□□ 0.66
KRCC1Q9NPI7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.2■□□□□ 0.66
KRCC1Q9NPI7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.2■□□□□ 0.66
KRCC1Q9NPI7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
KRCC1Q9NPI7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
KRCC1Q9NPI7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRCC1Q9NPI7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRCC1Q9NPI7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRCC1Q9NPI7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.19■□□□□ 0.66
KRCC1Q9NPI7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.19■□□□□ 0.66
KRCC1Q9NPI7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRCC1Q9NPI7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRCC1Q9NPI7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRCC1Q9NPI7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRCC1Q9NPI7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.19■□□□□ 0.66
KRCC1Q9NPI7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRCC1Q9NPI7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRCC1Q9NPI7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRCC1Q9NPI7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
KRCC1Q9NPI7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.19■□□□□ 0.66
KRCC1Q9NPI7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.19■□□□□ 0.66
KRCC1Q9NPI7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRCC1Q9NPI7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRCC1Q9NPI7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRCC1Q9NPI7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.19■□□□□ 0.66
KRCC1Q9NPI7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.19■□□□□ 0.66
KRCC1Q9NPI7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRCC1Q9NPI7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRCC1Q9NPI7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
KRCC1Q9NPI7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
KRCC1Q9NPI7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms