Protein–RNA interactions for Protein: Q9HCN8

SDF2L1, Stromal cell-derived factor 2-like protein 1, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1Q9HCN8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SDF2L1Q9HCN8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SDF2L1Q9HCN8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.38■□□□□ 0.21
SDF2L1Q9HCN8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SDF2L1Q9HCN8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SDF2L1Q9HCN8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SDF2L1Q9HCN8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SDF2L1Q9HCN8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SDF2L1Q9HCN8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SDF2L1Q9HCN8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 AC026471.6-201ENST00000622954 1905 ntBASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 AC006128.1-201ENST00000624704 1661 ntBASIC16.37■□□□□ 0.21
SDF2L1Q9HCN8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 MIR4508-201ENST00000584178 70 ntBASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SDF2L1Q9HCN8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SDF2L1Q9HCN8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SDF2L1Q9HCN8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SDF2L1Q9HCN8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SDF2L1Q9HCN8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SDF2L1Q9HCN8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SDF2L1Q9HCN8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SDF2L1Q9HCN8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SDF2L1Q9HCN8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SDF2L1Q9HCN8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SDF2L1Q9HCN8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SDF2L1Q9HCN8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
SDF2L1Q9HCN8 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.35■□□□□ 0.21
SDF2L1Q9HCN8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.35■□□□□ 0.21
SDF2L1Q9HCN8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.35■□□□□ 0.21
SDF2L1Q9HCN8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SDF2L1Q9HCN8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SDF2L1Q9HCN8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.35■□□□□ 0.21
SDF2L1Q9HCN8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.35■□□□□ 0.21
SDF2L1Q9HCN8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.35■□□□□ 0.21
SDF2L1Q9HCN8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SDF2L1Q9HCN8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SDF2L1Q9HCN8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.35■□□□□ 0.21
SDF2L1Q9HCN8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.35■□□□□ 0.21
SDF2L1Q9HCN8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.34■□□□□ 0.21
SDF2L1Q9HCN8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.34■□□□□ 0.21
SDF2L1Q9HCN8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SDF2L1Q9HCN8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.34■□□□□ 0.21
SDF2L1Q9HCN8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.34■□□□□ 0.21
SDF2L1Q9HCN8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SDF2L1Q9HCN8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.34■□□□□ 0.21
SDF2L1Q9HCN8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SDF2L1Q9HCN8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SDF2L1Q9HCN8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
SDF2L1Q9HCN8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms