Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZCCHC4Q9H5U6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZCCHC4Q9H5U6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZCCHC4Q9H5U6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZCCHC4Q9H5U6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ZCCHC4Q9H5U6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZCCHC4Q9H5U6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ZCCHC4Q9H5U6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZCCHC4Q9H5U6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
ZCCHC4Q9H5U6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.43■□□□□ 0.54
ZCCHC4Q9H5U6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZCCHC4Q9H5U6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.43■□□□□ 0.54
ZCCHC4Q9H5U6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZCCHC4Q9H5U6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZCCHC4Q9H5U6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
ZCCHC4Q9H5U6 AL138724.1-201ENST00000606771 1088 ntBASIC18.43■□□□□ 0.54
ZCCHC4Q9H5U6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ZCCHC4Q9H5U6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.43■□□□□ 0.54
ZCCHC4Q9H5U6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZCCHC4Q9H5U6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZCCHC4Q9H5U6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ZCCHC4Q9H5U6 SYT6-210ENST00000641643 1587 ntBASIC18.42■□□□□ 0.54
ZCCHC4Q9H5U6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ZCCHC4Q9H5U6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZCCHC4Q9H5U6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.42■□□□□ 0.54
ZCCHC4Q9H5U6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.42■□□□□ 0.54
ZCCHC4Q9H5U6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.42■□□□□ 0.54
ZCCHC4Q9H5U6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.42■□□□□ 0.54
ZCCHC4Q9H5U6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZCCHC4Q9H5U6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZCCHC4Q9H5U6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZCCHC4Q9H5U6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.42■□□□□ 0.54
ZCCHC4Q9H5U6 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.42■□□□□ 0.54
ZCCHC4Q9H5U6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
ZCCHC4Q9H5U6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.42■□□□□ 0.54
ZCCHC4Q9H5U6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
ZCCHC4Q9H5U6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.42■□□□□ 0.54
ZCCHC4Q9H5U6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZCCHC4Q9H5U6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZCCHC4Q9H5U6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.42■□□□□ 0.54
ZCCHC4Q9H5U6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZCCHC4Q9H5U6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.42■□□□□ 0.54
ZCCHC4Q9H5U6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZCCHC4Q9H5U6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZCCHC4Q9H5U6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZCCHC4Q9H5U6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZCCHC4Q9H5U6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.41■□□□□ 0.54
ZCCHC4Q9H5U6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
ZCCHC4Q9H5U6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZCCHC4Q9H5U6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ZCCHC4Q9H5U6 DUX4L19-201ENST00000557448 1267 ntBASIC18.41■□□□□ 0.54
ZCCHC4Q9H5U6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.41■□□□□ 0.54
ZCCHC4Q9H5U6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZCCHC4Q9H5U6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.41■□□□□ 0.54
ZCCHC4Q9H5U6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZCCHC4Q9H5U6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
ZCCHC4Q9H5U6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZCCHC4Q9H5U6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZCCHC4Q9H5U6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZCCHC4Q9H5U6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZCCHC4Q9H5U6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ZCCHC4Q9H5U6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZCCHC4Q9H5U6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZCCHC4Q9H5U6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZCCHC4Q9H5U6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZCCHC4Q9H5U6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZCCHC4Q9H5U6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZCCHC4Q9H5U6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZCCHC4Q9H5U6 SERBP1P1-201ENST00000396021 1160 ntBASIC18.4■□□□□ 0.54
ZCCHC4Q9H5U6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZCCHC4Q9H5U6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
ZCCHC4Q9H5U6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZCCHC4Q9H5U6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZCCHC4Q9H5U6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ZCCHC4Q9H5U6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZCCHC4Q9H5U6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZCCHC4Q9H5U6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZCCHC4Q9H5U6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ZCCHC4Q9H5U6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZCCHC4Q9H5U6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZCCHC4Q9H5U6 AC073314.1-201ENST00000568729 2216 ntBASIC18.39■□□□□ 0.54
ZCCHC4Q9H5U6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ZCCHC4Q9H5U6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
ZCCHC4Q9H5U6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZCCHC4Q9H5U6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZCCHC4Q9H5U6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZCCHC4Q9H5U6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZCCHC4Q9H5U6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.39■□□□□ 0.53
ZCCHC4Q9H5U6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZCCHC4Q9H5U6 AP004607.7-201ENST00000527152 1677 ntBASIC18.39■□□□□ 0.53
ZCCHC4Q9H5U6 AC006128.1-201ENST00000624704 1661 ntBASIC18.39■□□□□ 0.53
ZCCHC4Q9H5U6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ZCCHC4Q9H5U6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.39■□□□□ 0.53
ZCCHC4Q9H5U6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZCCHC4Q9H5U6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ZCCHC4Q9H5U6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZCCHC4Q9H5U6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ZCCHC4Q9H5U6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZCCHC4Q9H5U6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ZCCHC4Q9H5U6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms