Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 FAM20B-202ENST00000440702 603 ntTSL 316.28■□□□□ 0.22e-6■■■■□ 22.1
CSTF2TQ9H0L4 TRIP12-208ENST00000430954 719 ntTSL 211.65□□□□□ -0.549e-8■■■■□ 22.1
CSTF2TQ9H0L4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.8■□□□□ 0.127e-7■■■■□ 22.1
CSTF2TQ9H0L4 NPTN-206ENST00000563753 599 ntTSL 214.59□□□□□ -0.077e-7■■■■□ 22.1
CSTF2TQ9H0L4 NPTN-209ENST00000565325 858 ntTSL 213.56□□□□□ -0.247e-7■■■■□ 22.1
CSTF2TQ9H0L4 NPTN-207ENST00000564551 586 ntTSL 313.49□□□□□ -0.257e-7■■■■□ 22.1
CSTF2TQ9H0L4 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC12.9□□□□□ -0.347e-7■■■■□ 22.1
CSTF2TQ9H0L4 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.447e-7■■■■□ 22.1
CSTF2TQ9H0L4 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.527e-7■■■■□ 22.1
CSTF2TQ9H0L4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.94■□□□□ 0.621e-6■■■■□ 22.1
CSTF2TQ9H0L4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.68■□□□□ 0.96e-8■■■■□ 22.1
CSTF2TQ9H0L4 ALDH16A1-204ENST00000593417 2343 ntTSL 220.44■□□□□ 0.866e-8■■■■□ 22.1
CSTF2TQ9H0L4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.01■□□□□ 0.796e-8■■■■□ 22.1
CSTF2TQ9H0L4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.16e-8■■■■□ 22.1
CSTF2TQ9H0L4 ALDH16A1-207ENST00000599652 3995 ntTSL 213.3□□□□□ -0.286e-8■■■■□ 22.1
CSTF2TQ9H0L4 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.224e-7■■■■□ 22.1
CSTF2TQ9H0L4 FBXO11-209ENST00000492225 2216 ntTSL 1 (best)11.15□□□□□ -0.632e-9■■■■□ 22
CSTF2TQ9H0L4 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC8.02□□□□□ -1.132e-9■■■■□ 22
CSTF2TQ9H0L4 TMEM39A-211ENST00000491685 852 ntTSL 510.34□□□□□ -0.754e-6■■■■□ 22
CSTF2TQ9H0L4 TMEM39A-208ENST00000486159 826 ntTSL 38.79□□□□□ -14e-6■■■■□ 22
CSTF2TQ9H0L4 TMEM39A-201ENST00000319172 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.024e-6■■■■□ 22
CSTF2TQ9H0L4 TMEM39A-202ENST00000438581 4393 ntTSL 1 (best)7.58□□□□□ -1.24e-6■■■■□ 22
CSTF2TQ9H0L4 ARHGEF2-202ENST00000313695 4080 ntTSL 1 (best) BASIC10.94□□□□□ -0.662e-7■■■■□ 22
CSTF2TQ9H0L4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.97■□□□□ 0.791e-6■■■■□ 22
CSTF2TQ9H0L4 EXD3-205ENST00000475006 1132 ntTSL 319.97■□□□□ 0.791e-6■■■■□ 22
CSTF2TQ9H0L4 EXD3-202ENST00000460390 1432 ntTSL 217.64■□□□□ 0.411e-6■■■■□ 22
CSTF2TQ9H0L4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.622e-7■■■■□ 22
CSTF2TQ9H0L4 TMEM129-205ENST00000480360 761 ntTSL 316.19■□□□□ 0.182e-7■■■■□ 22
CSTF2TQ9H0L4 GATD1-213ENST00000532320 1273 ntTSL 1 (best)15.71■□□□□ 0.114e-7■■■■□ 22
CSTF2TQ9H0L4 GATD1-216ENST00000534603 863 ntTSL 1 (best)15.33■□□□□ 0.044e-7■■■■□ 22
CSTF2TQ9H0L4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.26■□□□□ 0.034e-7■■■■□ 22
CSTF2TQ9H0L4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.73□□□□□ -0.214e-7■■■■□ 22
CSTF2TQ9H0L4 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.46□□□□□ -0.254e-7■■■■□ 22
CSTF2TQ9H0L4 GATD1-209ENST00000528602 569 ntTSL 213.25□□□□□ -0.294e-7■■■■□ 22
CSTF2TQ9H0L4 GATD1-211ENST00000529966 800 ntTSL 1 (best)12.98□□□□□ -0.334e-7■■■■□ 22
CSTF2TQ9H0L4 GATD1-214ENST00000532839 559 ntTSL 1 (best)12.92□□□□□ -0.344e-7■■■■□ 22
CSTF2TQ9H0L4 GATD1-201ENST00000319863 4357 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.714e-7■■■■□ 22
CSTF2TQ9H0L4 GATD1-202ENST00000354286 3973 ntTSL 59.73□□□□□ -0.854e-7■■■■□ 22
CSTF2TQ9H0L4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.61■□□□□ 0.573e-6■■■■□ 22
CSTF2TQ9H0L4 AL121845.3-202ENST00000632538 872 ntAPPRIS P1 TSL 319.56■□□□□ 0.722e-7■■■■□ 22
CSTF2TQ9H0L4 SSBP4-208ENST00000600628 550 ntTSL 38.15□□□□□ -1.11e-6■■■■□ 22
CSTF2TQ9H0L4 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.525e-7■■■■□ 22
CSTF2TQ9H0L4 EXOSC7-207ENST00000481405 768 ntTSL 328.43■■■□□ 2.148e-7■■■■□ 22
CSTF2TQ9H0L4 CLEC3B-203ENST00000490386 708 ntTSL 327.29■■□□□ 1.968e-7■■■■□ 22
CSTF2TQ9H0L4 HAGH-211ENST00000569339 820 ntTSL 322.85■■□□□ 1.254e-7■■■■□ 22
CSTF2TQ9H0L4 SCRIB-207ENST00000531942 421 ntTSL 220.71■□□□□ 0.918e-7■■■■□ 22
CSTF2TQ9H0L4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.724e-7■■■■□ 22
CSTF2TQ9H0L4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.56■□□□□ 0.724e-7■■■■□ 22
CSTF2TQ9H0L4 TSNARE1-207ENST00000521825 346 ntTSL 316.6■□□□□ 0.258e-7■■■■□ 22
CSTF2TQ9H0L4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.49■□□□□ 0.234e-13■■■■□ 22
CSTF2TQ9H0L4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.13■□□□□ 0.174e-7■■■■□ 22
CSTF2TQ9H0L4 CHTF18-215ENST00000564940 197 ntTSL 215.51■□□□□ 0.078e-7■■■■□ 22
CSTF2TQ9H0L4 MIB2-224ENST00000508455 555 ntTSL 215.45■□□□□ 0.068e-7■■■■□ 22
CSTF2TQ9H0L4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.054e-7■■■■□ 22
CSTF2TQ9H0L4 MIB2-228ENST00000512004 598 ntTSL 414.62□□□□□ -0.078e-7■■■■□ 22
CSTF2TQ9H0L4 HAGH-204ENST00000564445 864 ntTSL 314.37□□□□□ -0.114e-7■■■■□ 22
CSTF2TQ9H0L4 EXOSC7-210ENST00000491476 1395 ntTSL 513.23□□□□□ -0.298e-7■■■■□ 22
CSTF2TQ9H0L4 EXOSC7-203ENST00000461361 1593 ntTSL 212.75□□□□□ -0.378e-7■■■■□ 22
CSTF2TQ9H0L4 EXOSC7-205ENST00000468667 831 ntTSL 511.91□□□□□ -0.58e-7■■■■□ 22
CSTF2TQ9H0L4 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.518e-7■■■■□ 22
CSTF2TQ9H0L4 EXOSC7-209ENST00000486727 1647 ntTSL 29.51□□□□□ -0.898e-7■■■■□ 22
CSTF2TQ9H0L4 EXOSC7-202ENST00000459856 434 ntTSL 36.99□□□□□ -1.298e-7■■■■□ 22
CSTF2TQ9H0L4 DPH1-216ENST00000576891 537 ntTSL 410.31□□□□□ -0.766e-7■■■■□ 22
CSTF2TQ9H0L4 SMCHD1-213ENST00000609587 460 nt6.6□□□□□ -1.352e-8■■■■□ 22
CSTF2TQ9H0L4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 07e-7■■■■□ 22
CSTF2TQ9H0L4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.562e-7■■■■□ 22
CSTF2TQ9H0L4 STRN4-205ENST00000593979 675 ntTSL 417.01■□□□□ 0.312e-7■■■■□ 22
CSTF2TQ9H0L4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.212e-7■■■■□ 22
CSTF2TQ9H0L4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.89■□□□□ 0.132e-7■■■■□ 22
CSTF2TQ9H0L4 STRN4-203ENST00000435164 1551 ntTSL 213.13□□□□□ -0.312e-7■■■■□ 22
CSTF2TQ9H0L4 STRN4-220ENST00000600710 565 ntTSL 513.12□□□□□ -0.312e-7■■■■□ 22
CSTF2TQ9H0L4 STRN4-209ENST00000594704 913 ntTSL 513.09□□□□□ -0.312e-7■■■■□ 22
CSTF2TQ9H0L4 STRN4-212ENST00000596012 560 ntTSL 411.87□□□□□ -0.512e-7■■■■□ 22
CSTF2TQ9H0L4 B3GNTL1-208ENST00000572977 2446 ntTSL 213.2□□□□□ -0.35e-7■■■■□ 22
CSTF2TQ9H0L4 WNK2-214ENST00000474009 561 ntTSL 316.21■□□□□ 0.193e-7■■■■□ 22
CSTF2TQ9H0L4 WNK2-208ENST00000453718 1937 ntTSL 515.41■□□□□ 0.063e-7■■■■□ 22
CSTF2TQ9H0L4 WNK2-203ENST00000411624 6679 ntTSL 1 (best)15.22■□□□□ 0.033e-7■■■■□ 22
CSTF2TQ9H0L4 WNK2-207ENST00000448251 3224 ntTSL 212.11□□□□□ -0.473e-7■■■■□ 22
CSTF2TQ9H0L4 WNK2-216ENST00000479696 532 ntTSL 37.51□□□□□ -1.213e-7■■■■□ 22
CSTF2TQ9H0L4 AL360181.1-201ENST00000452591 184 ntTSL 5 BASIC9.01□□□□□ -0.974e-7■■■■□ 22
CSTF2TQ9H0L4 PTPN12-216ENST00000523952 500 ntTSL 48.99□□□□□ -0.975e-11■■■■□ 22
CSTF2TQ9H0L4 TCF25-222ENST00000568412 797 ntTSL 315.92■□□□□ 0.142e-8■■■■□ 22
CSTF2TQ9H0L4 TCF25-204ENST00000561958 763 ntTSL 315.92■□□□□ 0.142e-8■■■■□ 22
CSTF2TQ9H0L4 RNASET2-209ENST00000499370 2164 ntTSL 210.32□□□□□ -0.761e-9■■■■□ 21.9
CSTF2TQ9H0L4 RNASET2-208ENST00000496851 881 ntTSL 59.05□□□□□ -0.961e-9■■■■□ 21.9
CSTF2TQ9H0L4 CANT1-210ENST00000591732 578 ntTSL 417.82■□□□□ 0.449e-7■■■■□ 21.9
CSTF2TQ9H0L4 CANT1-213ENST00000592033 502 ntTSL 217.82■□□□□ 0.449e-7■■■■□ 21.9
CSTF2TQ9H0L4 CANT1-204ENST00000587242 550 ntTSL 217.82■□□□□ 0.449e-7■■■■□ 21.9
CSTF2TQ9H0L4 CANT1-203ENST00000586916 769 ntTSL 317.82■□□□□ 0.449e-7■■■■□ 21.9
CSTF2TQ9H0L4 CANT1-212ENST00000591811 466 ntTSL 216.71■□□□□ 0.279e-7■■■■□ 21.9
CSTF2TQ9H0L4 CANT1-205ENST00000588075 881 ntTSL 215.87■□□□□ 0.139e-7■■■■□ 21.9
CSTF2TQ9H0L4 CANT1-215ENST00000592887 555 ntTSL 415.53■□□□□ 0.089e-7■■■■□ 21.9
CSTF2TQ9H0L4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.019e-7■■■■□ 21.9
CSTF2TQ9H0L4 CANT1-209ENST00000591625 599 ntTSL 414.02□□□□□ -0.179e-7■■■■□ 21.9
CSTF2TQ9H0L4 CANT1-214ENST00000592228 1546 ntTSL 513.7□□□□□ -0.229e-7■■■■□ 21.9
CSTF2TQ9H0L4 CANT1-208ENST00000590370 614 ntTSL 212.58□□□□□ -0.49e-7■■■■□ 21.9
CSTF2TQ9H0L4 CANT1-202ENST00000392446 3252 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.619e-7■■■■□ 21.9
CSTF2TQ9H0L4 CANT1-201ENST00000302345 3534 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.629e-7■■■■□ 21.9
CSTF2TQ9H0L4 CANT1-207ENST00000588611 900 ntTSL 310.86□□□□□ -0.679e-7■■■■□ 21.9
CSTF2TQ9H0L4 CCNG2-203ENST00000497512 2051 ntTSL 1 (best)24.46■■□□□ 1.511e-6■■■■□ 21.9
Retrieved 100 of 19,151 protein–RNA pairs in 149.8 ms