RNA–Protein interactions for RNA: ENST00000486727.1

EXOSC7-209, Transcript of exosome component 7, humanhuman

TSL 2

Gene EXOSC7, Length 1,647 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC7-209ENST00000486727 AEBP2Q6ZN18 517 aaPredicted RBP23.38■■□□□ 1.33
EXOSC7-209ENST00000486727 NISCHQ9Y2I1 1504 aa23.06■■□□□ 1.28
EXOSC7-209ENST00000486727 CHIC1Q5VXU3 224 aa22.81■■□□□ 1.24
EXOSC7-209ENST00000486727 SENP3Q9H4L4 574 aaPredicted RBP20.07■□□□□ 0.8
EXOSC7-209ENST00000486727 CCDC180Q9P1Z9 1646 aa20.03■□□□□ 0.8
EXOSC7-209ENST00000486727 PHF23Q9BUL5 403 aaPredicted RBP19.91■□□□□ 0.78
EXOSC7-209ENST00000486727 SLC24A1O60721 1099 aa19.77■□□□□ 0.76
EXOSC7-209ENST00000486727 ZCCHC6Q5VYS8 1495 aaKnown RBP19.38■□□□□ 0.69
EXOSC7-209ENST00000486727 DCAF8L2P0C7V8 631 aa19.13■□□□□ 0.65
EXOSC7-209ENST00000486727 EHMT2Q96KQ7 1210 aa19.11■□□□□ 0.65
EXOSC7-209ENST00000486727 DCAF1Q9Y4B6 1507 aa19.05■□□□□ 0.64
EXOSC7-209ENST00000486727 ABCC9O60706 1549 aa19.01■□□□□ 0.63
EXOSC7-209ENST00000486727 SHROOM4Q9ULL8 1493 aa18.97■□□□□ 0.63
EXOSC7-209ENST00000486727 MYO15BQ96JP2 1530 aa18.78■□□□□ 0.6
EXOSC7-209ENST00000486727 NACADO15069 1562 aa18.66■□□□□ 0.58
EXOSC7-209ENST00000486727 PLPPR3Q6T4P5 718 aa18.51■□□□□ 0.55
EXOSC7-209ENST00000486727 FOXD1Q16676 465 aa18.5■□□□□ 0.55
EXOSC7-209ENST00000486727 RB1CC1Q8TDY2 1594 aa18.48■□□□□ 0.55
EXOSC7-209ENST00000486727 SCRIBQ14160 1630 aa18.47■□□□□ 0.55
EXOSC7-209ENST00000486727 SUPT5HO00267 1087 aaKnown RBP18.34■□□□□ 0.53
EXOSC7-209ENST00000486727 RTN4Q9NQC3 1192 aaKnown RBP18.19■□□□□ 0.5
EXOSC7-209ENST00000486727 UNC13AQ9UPW8 1703 aa18.05■□□□□ 0.48
EXOSC7-209ENST00000486727 CSRNP3Q8WYN3 585 aa18.02■□□□□ 0.48
EXOSC7-209ENST00000486727 AMER1Q5JTC6 1135 aaPredicted RBP17.96■□□□□ 0.47
EXOSC7-209ENST00000486727 RSF1Q96T23 1441 aaPredicted RBP17.95■□□□□ 0.46
EXOSC7-209ENST00000486727 KCNA4P22459 653 aa17.93■□□□□ 0.46
EXOSC7-209ENST00000486727 CECR2Q9BXF3 1484 aa17.91■□□□□ 0.46
EXOSC7-209ENST00000486727 PABPN1Q86U42 306 aaKnown RBP eCLIP17.87■□□□□ 0.45
EXOSC7-209ENST00000486727 BICRAQ9NZM4 1560 aa17.87■□□□□ 0.45
EXOSC7-209ENST00000486727 MROH2BQ7Z745 1585 aa17.82■□□□□ 0.44
EXOSC7-209ENST00000486727 BAZ1AQ9NRL2 1556 aaPredicted RBP17.81■□□□□ 0.44
EXOSC7-209ENST00000486727 NCBP3Q53F19 620 aaKnown RBP17.72■□□□□ 0.43
EXOSC7-209ENST00000486727 SMARCA4P51532 1647 aa17.7■□□□□ 0.42
EXOSC7-209ENST00000486727 WIZO95785 1651 aa17.68■□□□□ 0.42
EXOSC7-209ENST00000486727 ADRA2BP18089 450 aa17.59■□□□□ 0.41
EXOSC7-209ENST00000486727 PPP6R1Q9UPN7 881 aa17.59■□□□□ 0.41
EXOSC7-209ENST00000486727 DNAJC5BQ9UF47 199 aa17.55■□□□□ 0.4
EXOSC7-209ENST00000486727 DAXXQ9UER7 740 aaPredicted RBP17.54■□□□□ 0.4
EXOSC7-209ENST00000486727 TOP2AP11388 1531 aaKnown RBP17.51■□□□□ 0.39
EXOSC7-209ENST00000486727 PIAS4Q8N2W9 510 aaPredicted RBP17.47■□□□□ 0.39
EXOSC7-209ENST00000486727 PEG3Q9GZU2 1588 aa17.45■□□□□ 0.38
EXOSC7-209ENST00000486727 SMARCA2P51531 1590 aa17.4■□□□□ 0.38
EXOSC7-209ENST00000486727 ATAD2BQ9ULI0 1458 aa17.39■□□□□ 0.37
EXOSC7-209ENST00000486727 EIF4G1Q04637 1599 aaKnown RBP17.35■□□□□ 0.37
EXOSC7-209ENST00000486727 CCDC88BA6NC98 1476 aa17.34■□□□□ 0.37
EXOSC7-209ENST00000486727 BAZ1BQ9UIG0 1483 aaKnown RBP17.32■□□□□ 0.36
EXOSC7-209ENST00000486727 SLC4A1APQ9BWU0 796 aaKnown RBP17.3■□□□□ 0.36
EXOSC7-209ENST00000486727 MSH5O43196 834 aa17.29■□□□□ 0.36
EXOSC7-209ENST00000486727 TRIM41Q8WV44 630 aa17.24■□□□□ 0.35
EXOSC7-209ENST00000486727 NCAPD3P42695 1498 aa17.22■□□□□ 0.35
EXOSC7-209ENST00000486727 HMGXB3Q12766 1538 aa17.19■□□□□ 0.34
EXOSC7-209ENST00000486727 CC2D2AQ9P2K1 1620 aa17.18■□□□□ 0.34
EXOSC7-209ENST00000486727 PRKCSHP14314 528 aaPredicted RBP17.1■□□□□ 0.33
EXOSC7-209ENST00000486727 ABCC8Q09428 1581 aa17.01■□□□□ 0.31
EXOSC7-209ENST00000486727 LOC105371045A0A1W2PR82 267 aa16.93■□□□□ 0.3
EXOSC7-209ENST00000486727 FAM9AQ8IZU1 332 aaPredicted RBP16.93■□□□□ 0.3
EXOSC7-209ENST00000486727 WRNQ14191 1432 aaPredicted RBP eCLIP16.92■□□□□ 0.3
EXOSC7-209ENST00000486727 CFTRP13569 1480 aa16.87■□□□□ 0.29
EXOSC7-209ENST00000486727 ARXQ96QS3 562 aa16.82■□□□□ 0.28
EXOSC7-209ENST00000486727 CADPSQ9ULU8 1353 aa16.81■□□□□ 0.28
EXOSC7-209ENST00000486727 SYNJ1O43426 1573 aa16.8■□□□□ 0.28
EXOSC7-209ENST00000486727 PRDM2Q13029 1718 aa16.76■□□□□ 0.27
EXOSC7-209ENST00000486727 TAOK2Q9UL54 1235 aa16.75■□□□□ 0.27
EXOSC7-209ENST00000486727 EEA1Q15075 1411 aa16.75■□□□□ 0.27
EXOSC7-209ENST00000486727 TOP2BQ02880 1626 aa16.73■□□□□ 0.27
EXOSC7-209ENST00000486727 SOGA1O94964 1423 aa16.73■□□□□ 0.27
EXOSC7-209ENST00000486727 BIVM-ERCC5R4GMW8 1640 aa16.7■□□□□ 0.26
EXOSC7-209ENST00000486727 TIMELESSQ9UNS1 1208 aa16.68■□□□□ 0.26
EXOSC7-209ENST00000486727 CUX1P39880 1505 aa16.66■□□□□ 0.26
EXOSC7-209ENST00000486727 BCANQ96GW7 911 aa16.65■□□□□ 0.26
EXOSC7-209ENST00000486727 RUSC2Q8N2Y8 1516 aa16.65■□□□□ 0.26
EXOSC7-209ENST00000486727 ZBTB22O15209 634 aa16.63■□□□□ 0.25
EXOSC7-209ENST00000486727 FANCD2Q9BXW9 1451 aa16.62■□□□□ 0.25
EXOSC7-209ENST00000486727 LAMC3Q9Y6N6 1575 aa16.61■□□□□ 0.25
EXOSC7-209ENST00000486727 NESP48681 1621 aa16.6■□□□□ 0.25
EXOSC7-209ENST00000486727 PDS5BQ9NTI5 1447 aa16.53■□□□□ 0.24
EXOSC7-209ENST00000486727 GOLGA3Q08378 1498 aa16.52■□□□□ 0.24
EXOSC7-209ENST00000486727 CEP164Q9UPV0 1460 aa16.51■□□□□ 0.23
EXOSC7-209ENST00000486727 UBTFP17480 764 aaKnown RBP16.51■□□□□ 0.23
EXOSC7-209ENST00000486727 PLCB2Q00722 1185 aa16.51■□□□□ 0.23
EXOSC7-209ENST00000486727 KIF27Q86VH2 1401 aa16.5■□□□□ 0.23
EXOSC7-209ENST00000486727 TNIKQ9UKE5 1360 aa16.49■□□□□ 0.23
EXOSC7-209ENST00000486727 KIF21BO75037 1637 aa16.49■□□□□ 0.23
EXOSC7-209ENST00000486727 DNMBPQ6XZF7 1577 aa16.48■□□□□ 0.23
EXOSC7-209ENST00000486727 FGD5Q6ZNL6 1462 aa16.47■□□□□ 0.23
EXOSC7-209ENST00000486727 TOPBP1Q92547 1522 aa16.45■□□□□ 0.22
EXOSC7-209ENST00000486727 TULP1O00294 542 aaPredicted RBP16.43■□□□□ 0.22
EXOSC7-209ENST00000486727 TPRNQ4KMQ1 711 aa16.42■□□□□ 0.22
EXOSC7-209ENST00000486727 CEP162Q5TB80 1403 aa16.41■□□□□ 0.22
EXOSC7-209ENST00000486727 CUX2O14529 1486 aa16.41■□□□□ 0.22
EXOSC7-209ENST00000486727 RAPGEF2Q9Y4G8 1499 aa16.39■□□□□ 0.21
EXOSC7-209ENST00000486727 KIF21AQ7Z4S6 1674 aa16.38■□□□□ 0.21
EXOSC7-209ENST00000486727 URB2Q14146 1524 aaKnown RBP16.38■□□□□ 0.21
EXOSC7-209ENST00000486727 PRXQ9BXM0 1461 aa16.37■□□□□ 0.21
EXOSC7-209ENST00000486727 POLA1P09884 1462 aaPredicted RBP16.37■□□□□ 0.21
EXOSC7-209ENST00000486727 ERICH3Q5RHP9 1530 aa16.36■□□□□ 0.21
EXOSC7-209ENST00000486727 RAD54L2Q9Y4B4 1467 aa16.33■□□□□ 0.2
EXOSC7-209ENST00000486727 SCAF1Q9H7N4 1312 aaKnown RBP16.32■□□□□ 0.2
EXOSC7-209ENST00000486727 ABCA10Q8WWZ4 1543 aa16.32■□□□□ 0.2
EXOSC7-209ENST00000486727 PCGF6Q9BYE7 350 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms