Protein–RNA interactions for Protein: Q969L4

LSM10, U7 snRNA-associated Sm-like protein LSm10, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10Q969L4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM10Q969L4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LSM10Q969L4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM10Q969L4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.12■□□□□ 0.33
LSM10Q969L4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
LSM10Q969L4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.12■□□□□ 0.33
LSM10Q969L4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.12■□□□□ 0.33
LSM10Q969L4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM10Q969L4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM10Q969L4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LSM10Q969L4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSM10Q969L4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.11■□□□□ 0.33
LSM10Q969L4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM10Q969L4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM10Q969L4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM10Q969L4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.11■□□□□ 0.33
LSM10Q969L4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM10Q969L4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSM10Q969L4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.11■□□□□ 0.33
LSM10Q969L4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LSM10Q969L4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LSM10Q969L4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSM10Q969L4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSM10Q969L4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
LSM10Q969L4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LSM10Q969L4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LSM10Q969L4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.11■□□□□ 0.33
LSM10Q969L4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM10Q969L4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.1■□□□□ 0.33
LSM10Q969L4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
LSM10Q969L4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
LSM10Q969L4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM10Q969L4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM10Q969L4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM10Q969L4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM10Q969L4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM10Q969L4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM10Q969L4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM10Q969L4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM10Q969L4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM10Q969L4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM10Q969L4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM10Q969L4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LSM10Q969L4 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.1■□□□□ 0.33
LSM10Q969L4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM10Q969L4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LSM10Q969L4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM10Q969L4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LSM10Q969L4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.1■□□□□ 0.33
LSM10Q969L4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM10Q969L4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.1■□□□□ 0.33
LSM10Q969L4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.09■□□□□ 0.33
LSM10Q969L4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LSM10Q969L4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.09■□□□□ 0.33
LSM10Q969L4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.09■□□□□ 0.33
LSM10Q969L4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSM10Q969L4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSM10Q969L4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LSM10Q969L4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LSM10Q969L4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.09■□□□□ 0.33
LSM10Q969L4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.09■□□□□ 0.33
LSM10Q969L4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.09■□□□□ 0.33
LSM10Q969L4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.09■□□□□ 0.33
LSM10Q969L4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.09■□□□□ 0.33
LSM10Q969L4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSM10Q969L4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.09■□□□□ 0.33
LSM10Q969L4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LSM10Q969L4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LSM10Q969L4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSM10Q969L4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LSM10Q969L4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.09■□□□□ 0.33
LSM10Q969L4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.09■□□□□ 0.33
LSM10Q969L4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LSM10Q969L4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.09■□□□□ 0.33
LSM10Q969L4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSM10Q969L4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.09■□□□□ 0.33
LSM10Q969L4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LSM10Q969L4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LSM10Q969L4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LSM10Q969L4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
LSM10Q969L4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LSM10Q969L4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
LSM10Q969L4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LSM10Q969L4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
LSM10Q969L4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LSM10Q969L4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LSM10Q969L4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LSM10Q969L4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LSM10Q969L4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.08■□□□□ 0.33
LSM10Q969L4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LSM10Q969L4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
LSM10Q969L4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSM10Q969L4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSM10Q969L4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSM10Q969L4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.08■□□□□ 0.32
LSM10Q969L4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.08■□□□□ 0.32
LSM10Q969L4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.08■□□□□ 0.32
LSM10Q969L4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LSM10Q969L4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.08■□□□□ 0.32
LSM10Q969L4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms