Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HPS1Q92902 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HPS1Q92902 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HPS1Q92902 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HPS1Q92902 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HPS1Q92902 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HPS1Q92902 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HPS1Q92902 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
HPS1Q92902 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HPS1Q92902 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
HPS1Q92902 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.04■□□□□ 0.64
HPS1Q92902 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HPS1Q92902 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HPS1Q92902 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.04■□□□□ 0.64
HPS1Q92902 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HPS1Q92902 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HPS1Q92902 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HPS1Q92902 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.04■□□□□ 0.64
HPS1Q92902 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS1Q92902 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS1Q92902 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS1Q92902 SYT6-210ENST00000641643 1587 ntBASIC19.03■□□□□ 0.64
HPS1Q92902 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
HPS1Q92902 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS1Q92902 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS1Q92902 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS1Q92902 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS1Q92902 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HPS1Q92902 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS1Q92902 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HPS1Q92902 ZNRF2P3-201ENST00000424200 374 ntBASIC19.03■□□□□ 0.64
HPS1Q92902 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HPS1Q92902 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.03■□□□□ 0.64
HPS1Q92902 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS1Q92902 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HPS1Q92902 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS1Q92902 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS1Q92902 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS1Q92902 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HPS1Q92902 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS1Q92902 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.03■□□□□ 0.64
HPS1Q92902 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.02■□□□□ 0.64
HPS1Q92902 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.02■□□□□ 0.64
HPS1Q92902 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HPS1Q92902 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HPS1Q92902 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HPS1Q92902 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HPS1Q92902 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
HPS1Q92902 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HPS1Q92902 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.02■□□□□ 0.64
HPS1Q92902 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
HPS1Q92902 AL138724.1-201ENST00000606771 1088 ntBASIC19.02■□□□□ 0.64
HPS1Q92902 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HPS1Q92902 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HPS1Q92902 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HPS1Q92902 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
HPS1Q92902 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
HPS1Q92902 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HPS1Q92902 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HPS1Q92902 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS1Q92902 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.01■□□□□ 0.63
HPS1Q92902 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HPS1Q92902 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HPS1Q92902 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS1Q92902 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS1Q92902 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HPS1Q92902 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.01■□□□□ 0.63
HPS1Q92902 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.01■□□□□ 0.63
HPS1Q92902 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS1Q92902 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS1Q92902 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
HPS1Q92902 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
HPS1Q92902 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS1Q92902 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HPS1Q92902 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
HPS1Q92902 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS1Q92902 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19■□□□□ 0.63
HPS1Q92902 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19■□□□□ 0.63
HPS1Q92902 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19■□□□□ 0.63
HPS1Q92902 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
HPS1Q92902 AC009102.2-201ENST00000606772 1639 ntBASIC19■□□□□ 0.63
HPS1Q92902 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HPS1Q92902 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HPS1Q92902 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HPS1Q92902 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HPS1Q92902 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19■□□□□ 0.63
HPS1Q92902 GRAMD4P4-201ENST00000613563 1115 ntBASIC19■□□□□ 0.63
HPS1Q92902 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19■□□□□ 0.63
HPS1Q92902 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HPS1Q92902 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HPS1Q92902 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
HPS1Q92902 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HPS1Q92902 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
HPS1Q92902 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HPS1Q92902 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
HPS1Q92902 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HPS1Q92902 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HPS1Q92902 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.99■□□□□ 0.63
HPS1Q92902 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HPS1Q92902 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms