Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COPS9Q8WXC6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COPS9Q8WXC6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COPS9Q8WXC6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
COPS9Q8WXC6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.24□□□□□ -0.13
COPS9Q8WXC6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
COPS9Q8WXC6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS9Q8WXC6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COPS9Q8WXC6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.23□□□□□ -0.13
COPS9Q8WXC6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS9Q8WXC6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC14.23□□□□□ -0.13
COPS9Q8WXC6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC14.23□□□□□ -0.13
COPS9Q8WXC6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC14.23□□□□□ -0.13
COPS9Q8WXC6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS9Q8WXC6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS9Q8WXC6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS9Q8WXC6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
COPS9Q8WXC6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS9Q8WXC6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS9Q8WXC6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COPS9Q8WXC6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS9Q8WXC6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC14.23□□□□□ -0.13
COPS9Q8WXC6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS9Q8WXC6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COPS9Q8WXC6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS9Q8WXC6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS9Q8WXC6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
COPS9Q8WXC6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COPS9Q8WXC6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
COPS9Q8WXC6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.22□□□□□ -0.13
COPS9Q8WXC6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS9Q8WXC6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
COPS9Q8WXC6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC14.22□□□□□ -0.13
COPS9Q8WXC6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC14.22□□□□□ -0.13
COPS9Q8WXC6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC14.22□□□□□ -0.13
COPS9Q8WXC6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS9Q8WXC6 GAK-223ENST00000628912 497 ntTSL 5 BASIC14.22□□□□□ -0.13
COPS9Q8WXC6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC14.22□□□□□ -0.13
COPS9Q8WXC6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS9Q8WXC6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
COPS9Q8WXC6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS9Q8WXC6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS9Q8WXC6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS9Q8WXC6 HTR7P1-202ENST00000624664 4411 ntBASIC14.22□□□□□ -0.13
COPS9Q8WXC6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS9Q8WXC6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COPS9Q8WXC6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS9Q8WXC6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC14.22□□□□□ -0.13
COPS9Q8WXC6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
COPS9Q8WXC6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COPS9Q8WXC6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COPS9Q8WXC6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.21□□□□□ -0.13
COPS9Q8WXC6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COPS9Q8WXC6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC14.21□□□□□ -0.13
COPS9Q8WXC6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
COPS9Q8WXC6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COPS9Q8WXC6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COPS9Q8WXC6 AC004448.1-201ENST00000458332 883 ntBASIC14.21□□□□□ -0.13
COPS9Q8WXC6 AC022616.5-201ENST00000518796 181 ntBASIC14.21□□□□□ -0.13
COPS9Q8WXC6 MIR3648-2-201ENST00000581792 180 ntBASIC14.21□□□□□ -0.13
COPS9Q8WXC6 MIR3648-1-201ENST00000615959 180 ntBASIC14.21□□□□□ -0.13
COPS9Q8WXC6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
COPS9Q8WXC6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC14.21□□□□□ -0.13
COPS9Q8WXC6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COPS9Q8WXC6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COPS9Q8WXC6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC14.21□□□□□ -0.14
COPS9Q8WXC6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.21□□□□□ -0.14
COPS9Q8WXC6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC14.21□□□□□ -0.14
COPS9Q8WXC6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC14.21□□□□□ -0.14
COPS9Q8WXC6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
COPS9Q8WXC6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
COPS9Q8WXC6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
COPS9Q8WXC6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
COPS9Q8WXC6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 ZNRF2P2-203ENST00000454624 420 ntBASIC14.2□□□□□ -0.14
COPS9Q8WXC6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 AC022413.1-201ENST00000624602 984 ntBASIC14.2□□□□□ -0.14
COPS9Q8WXC6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms