Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23■■□□□ 1.27
TMEM40Q8WWA1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23■■□□□ 1.27
TMEM40Q8WWA1 AC068473.5-201ENST00000616428 2072 ntBASIC23■■□□□ 1.27
TMEM40Q8WWA1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TMEM40Q8WWA1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TMEM40Q8WWA1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TMEM40Q8WWA1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TMEM40Q8WWA1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TMEM40Q8WWA1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TMEM40Q8WWA1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23■■□□□ 1.27
TMEM40Q8WWA1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
TMEM40Q8WWA1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23■■□□□ 1.27
TMEM40Q8WWA1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23■■□□□ 1.27
TMEM40Q8WWA1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23■■□□□ 1.27
TMEM40Q8WWA1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.99■■□□□ 1.27
TMEM40Q8WWA1 AC010980.2-201ENST00000587099 1412 ntBASIC22.99■■□□□ 1.27
TMEM40Q8WWA1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.99■■□□□ 1.27
TMEM40Q8WWA1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.99■■□□□ 1.27
TMEM40Q8WWA1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
TMEM40Q8WWA1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TMEM40Q8WWA1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TMEM40Q8WWA1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
TMEM40Q8WWA1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.99■■□□□ 1.27
TMEM40Q8WWA1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TMEM40Q8WWA1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC22.99■■□□□ 1.27
TMEM40Q8WWA1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC22.99■■□□□ 1.27
TMEM40Q8WWA1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.99■■□□□ 1.27
TMEM40Q8WWA1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.99■■□□□ 1.27
TMEM40Q8WWA1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TMEM40Q8WWA1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TMEM40Q8WWA1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TMEM40Q8WWA1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC22.98■■□□□ 1.27
TMEM40Q8WWA1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.98■■□□□ 1.27
TMEM40Q8WWA1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.98■■□□□ 1.27
TMEM40Q8WWA1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC22.98■■□□□ 1.27
TMEM40Q8WWA1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TMEM40Q8WWA1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.98■■□□□ 1.27
TMEM40Q8WWA1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TMEM40Q8WWA1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
TMEM40Q8WWA1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
TMEM40Q8WWA1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TMEM40Q8WWA1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.98■■□□□ 1.27
TMEM40Q8WWA1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.98■■□□□ 1.27
TMEM40Q8WWA1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TMEM40Q8WWA1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.97■■□□□ 1.27
TMEM40Q8WWA1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TMEM40Q8WWA1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.97■■□□□ 1.27
TMEM40Q8WWA1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
TMEM40Q8WWA1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
TMEM40Q8WWA1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TMEM40Q8WWA1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.97■■□□□ 1.27
TMEM40Q8WWA1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TMEM40Q8WWA1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
TMEM40Q8WWA1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC22.97■■□□□ 1.27
TMEM40Q8WWA1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
TMEM40Q8WWA1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.97■■□□□ 1.27
TMEM40Q8WWA1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.97■■□□□ 1.27
TMEM40Q8WWA1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TMEM40Q8WWA1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TMEM40Q8WWA1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
TMEM40Q8WWA1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TMEM40Q8WWA1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TMEM40Q8WWA1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
TMEM40Q8WWA1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC22.96■■□□□ 1.27
TMEM40Q8WWA1 AC091799.1-201ENST00000422823 811 ntBASIC22.96■■□□□ 1.27
TMEM40Q8WWA1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.96■■□□□ 1.27
TMEM40Q8WWA1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22.96■■□□□ 1.27
TMEM40Q8WWA1 AC083880.1-201ENST00000608266 535 ntBASIC22.96■■□□□ 1.27
TMEM40Q8WWA1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
TMEM40Q8WWA1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
TMEM40Q8WWA1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.96■■□□□ 1.27
TMEM40Q8WWA1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TMEM40Q8WWA1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.96■■□□□ 1.27
TMEM40Q8WWA1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
TMEM40Q8WWA1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TMEM40Q8WWA1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TMEM40Q8WWA1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.95■■□□□ 1.26
TMEM40Q8WWA1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
TMEM40Q8WWA1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
TMEM40Q8WWA1 MYC-209ENST00000641252 345 ntBASIC22.95■■□□□ 1.26
TMEM40Q8WWA1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TMEM40Q8WWA1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TMEM40Q8WWA1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TMEM40Q8WWA1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TMEM40Q8WWA1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TMEM40Q8WWA1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22.94■■□□□ 1.26
TMEM40Q8WWA1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.94■■□□□ 1.26
TMEM40Q8WWA1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TMEM40Q8WWA1 RNA5SP413-201ENST00000516373 109 ntBASIC22.94■■□□□ 1.26
TMEM40Q8WWA1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.94■■□□□ 1.26
TMEM40Q8WWA1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TMEM40Q8WWA1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TMEM40Q8WWA1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.94■■□□□ 1.26
TMEM40Q8WWA1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
TMEM40Q8WWA1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
TMEM40Q8WWA1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TMEM40Q8WWA1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
TMEM40Q8WWA1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
TMEM40Q8WWA1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
TMEM40Q8WWA1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms