Protein–RNA interactions for Protein: Q8TDM0

BCAS4, Breast carcinoma-amplified sequence 4, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4Q8TDM0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
BCAS4Q8TDM0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
BCAS4Q8TDM0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
BCAS4Q8TDM0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
BCAS4Q8TDM0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
BCAS4Q8TDM0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BCAS4Q8TDM0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.14■□□□□ 0.97
BCAS4Q8TDM0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BCAS4Q8TDM0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BCAS4Q8TDM0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
BCAS4Q8TDM0 AC016575.1-201ENST00000607026 382 ntBASIC21.14■□□□□ 0.97
BCAS4Q8TDM0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BCAS4Q8TDM0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BCAS4Q8TDM0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
BCAS4Q8TDM0 PLK5-205ENST00000642079 1969 ntBASIC21.14■□□□□ 0.97
BCAS4Q8TDM0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
BCAS4Q8TDM0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
BCAS4Q8TDM0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
BCAS4Q8TDM0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
BCAS4Q8TDM0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BCAS4Q8TDM0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
BCAS4Q8TDM0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
BCAS4Q8TDM0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BCAS4Q8TDM0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
BCAS4Q8TDM0 LONRF2P2-201ENST00000439212 571 ntBASIC21.13■□□□□ 0.97
BCAS4Q8TDM0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
BCAS4Q8TDM0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.13■□□□□ 0.97
BCAS4Q8TDM0 AC133552.2-201ENST00000619106 1032 ntBASIC21.13■□□□□ 0.97
BCAS4Q8TDM0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.13■□□□□ 0.97
BCAS4Q8TDM0 AC020907.5-201ENST00000624372 1936 ntBASIC21.13■□□□□ 0.97
BCAS4Q8TDM0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.13■□□□□ 0.97
BCAS4Q8TDM0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.13■□□□□ 0.97
BCAS4Q8TDM0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BCAS4Q8TDM0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BCAS4Q8TDM0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
BCAS4Q8TDM0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BCAS4Q8TDM0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.12■□□□□ 0.97
BCAS4Q8TDM0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
BCAS4Q8TDM0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.12■□□□□ 0.97
BCAS4Q8TDM0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BCAS4Q8TDM0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.12■□□□□ 0.97
BCAS4Q8TDM0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BCAS4Q8TDM0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BCAS4Q8TDM0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
BCAS4Q8TDM0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS4Q8TDM0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS4Q8TDM0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS4Q8TDM0 AP000974.1-201ENST00000623909 2387 ntBASIC21.11■□□□□ 0.97
BCAS4Q8TDM0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS4Q8TDM0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS4Q8TDM0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.11■□□□□ 0.97
BCAS4Q8TDM0 AC004408.2-201ENST00000623613 2777 ntBASIC21.11■□□□□ 0.97
BCAS4Q8TDM0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS4Q8TDM0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS4Q8TDM0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS4Q8TDM0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.11■□□□□ 0.97
BCAS4Q8TDM0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS4Q8TDM0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS4Q8TDM0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS4Q8TDM0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS4Q8TDM0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS4Q8TDM0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
BCAS4Q8TDM0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.1■□□□□ 0.97
BCAS4Q8TDM0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BCAS4Q8TDM0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.1■□□□□ 0.97
BCAS4Q8TDM0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
BCAS4Q8TDM0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
BCAS4Q8TDM0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BCAS4Q8TDM0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
BCAS4Q8TDM0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.1■□□□□ 0.97
BCAS4Q8TDM0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.1■□□□□ 0.97
BCAS4Q8TDM0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BCAS4Q8TDM0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
BCAS4Q8TDM0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BCAS4Q8TDM0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
BCAS4Q8TDM0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.1■□□□□ 0.97
BCAS4Q8TDM0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
BCAS4Q8TDM0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
BCAS4Q8TDM0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BCAS4Q8TDM0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BCAS4Q8TDM0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.1■□□□□ 0.97
BCAS4Q8TDM0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BCAS4Q8TDM0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.1■□□□□ 0.97
BCAS4Q8TDM0 AF131216.4-201ENST00000638924 1588 ntBASIC21.1■□□□□ 0.97
BCAS4Q8TDM0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.09■□□□□ 0.97
BCAS4Q8TDM0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.09■□□□□ 0.97
BCAS4Q8TDM0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BCAS4Q8TDM0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BCAS4Q8TDM0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BCAS4Q8TDM0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
BCAS4Q8TDM0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.09■□□□□ 0.97
BCAS4Q8TDM0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.09■□□□□ 0.97
BCAS4Q8TDM0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.09■□□□□ 0.97
BCAS4Q8TDM0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.09■□□□□ 0.97
BCAS4Q8TDM0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BCAS4Q8TDM0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BCAS4Q8TDM0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
BCAS4Q8TDM0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
BCAS4Q8TDM0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BCAS4Q8TDM0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms